HHsearch alignment for GI: 254780628 and conserved domain: TIGR02109

>TIGR02109 PQQ_syn_pqqE coenzyme PQQ biosynthesis protein E; InterPro: IPR011843 This entry describes coenzyme PQQ biosynthesis protein E, a gene required for the biosynthesis of pyrrolo-quinoline-quinone (coenzyme PQQ). PQQ is required for some glucose dehydrogenases and alcohol dehydrogenases.; GO: 0051539 4 iron 4 sulfur cluster binding, 0018189 pyrroloquinoline quinone biosynthetic process.
Probab=98.55  E-value=2.1e-06  Score=62.63  Aligned_cols=197  Identities=16%  Similarity=0.298  Sum_probs=130.7

Q ss_pred             CCCCCCCCCCEEEEC--CCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCC
Q ss_conf             118376577302457--886628899999999999998761895058999628888878999999999766404764443
Q gi|254780628|r   28 CVKKCPYCDFNSHVR--RYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSN  105 (395)
Q Consensus        28 C~~~C~yC~f~~~~~--~~~~~~~~y~~~l~~Ei~~~~~~~~~~~~~~iy~GGGTPs~l~~~~l~~ll~~i~~~~~~~~~  105 (395)
T Consensus        17 CPL~CPYCSNPLel~R~~~EL~T~~W~~Vl-~qAa----~lG---vlqlHfSGGEP~a--R~DL~eLv~~A~~LGlYtNL   86 (363)
T TIGR02109        17 CPLQCPYCSNPLELARRKAELTTEEWTDVL-TQAA----ELG---VLQLHFSGGEPLA--RPDLVELVAHARRLGLYTNL   86 (363)
T ss_pred             CCCCCCCCCCCHHHHHHHCCCCHHHHHHHH-HHHH----HCC---CEEEECCCCCCCC--CCCHHHHHHHHHHCCCCHHH
T ss_conf             888777989706888511468888999999-9998----539---0675130776663--35779999999775870146


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHH-CCCCCHHHHHHHHHHHCCC--CCCCCCCCCCCCCC
Q ss_conf             32113321041002347766303454114323433201345542-2443134789999863024--44333210002585
Q gi|254780628|r  106 VEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLG-RNHNASEAIAAIHLARNIF--PRMSFDLIYALPKQ  182 (395)
Q Consensus       106 ~e~t~E~~P~~~~~~~l~~l~~~Gv~RiS~GvQs~~~~~l~~~~-R~~~~~~~~~~~~~~~~~~--~~v~iDli~GlPgq  182 (395)
T Consensus        87 --IT---SGvGLt~~rl~~L~~aGLDHvQlSfQ~vd~~~a~~iaG~k~A~~~Kl~~A~~v~~~g~PltLN~----V~HR~  157 (363)
T TIGR02109        87 --IT---SGVGLTEARLDALADAGLDHVQLSFQGVDEALADRIAGLKNAFEQKLAVARAVKAAGLPLTLNF----VLHRH  157 (363)
T ss_pred             --HH---HHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEH----CCCCC
T ss_conf             --77---6345679999999757985788764147878886412502589999999999996189817602----00242


Q ss_pred             CCCCCCCCHHHHHHCCCCCEEEEEEEEECCCEEHHHHH-CCCCCCCHHHHHH---HHHHHHHHHHHHCCCC
Q ss_conf             43221112788753180012346468825960001454-4980211035678---8999865578870962
Q gi|254780628|r  183 TMTQWEMELQRALSYAVDHLSLYQLTIEKGTLFYKMHK-DGDLVLPSENVAV---DLYNLTQSITSAHGLH  249 (395)
Q Consensus       183 t~e~~~~~l~~~~~l~p~~is~Y~l~i~~~t~l~~~~~-~~~~~~p~~~~~~---~~~~~a~e~L~~~GY~  249 (395)
T Consensus       158 Ni~~i~~~i~La~~L~AdrvE~A~------~QyYGWA~~NR~aLlPt~~Ql~~a~r~V~~aRer~~g~~~~  222 (363)
T TIGR02109       158 NIDQIPEIIELAIELGADRVELAT------TQYYGWALLNRAALLPTREQLEEATRIVEEARERLKGQGNP  222 (363)
T ss_pred             HHHHHHHHHHHHHHCCCCEEEEEE------ECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             021367899999863898488874------02022567745424898899999999999999998607998