HHsearch alignment for GI: 254780628 and conserved domain: TIGR02495

>TIGR02495 NrdG2 anaerobic ribonucleoside-triphosphate reductase activating protein; InterPro: IPR012840 This enzyme is a member of the radical-SAM family. It is often gene clustered with the class III (anaerobic) ribonucleotide triphosphate reductase (NrdD, IPR009161 from INTERPRO) and presumably fulfils the identical function as NrdG , , which utilises S-adenosyl methionine, an iron-sulphur cluster and a reductant (dihydroflavodoxin) to produce a glycine-centred radical in NrdD..
Probab=97.02  E-value=0.0036  Score=41.17  Aligned_cols=144  Identities=20%  Similarity=0.364  Sum_probs=91.5

Q ss_pred             CCCCCCCCCCE-EEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
Q ss_conf             11837657730-24578866288999999999999987618950589996288888789999999997664047644433
Q gi|254780628|r   28 CVKKCPYCDFN-SHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV  106 (395)
Q Consensus        28 C~~~C~yC~f~-~~~~~~~~~~~~y~~~l~~Ei~~~~~~~~~~~~~~iy~GGGTPs~l~~~~l~~ll~~i~~~~~~~~~~  106 (395)
T Consensus        26 Cn~~CpyCH-N~~~~~~~~~~~~~~~e~~~~~L~~R~~-----ll~gVVitGGEptlQ-~~eL~d~~~~v~~nlGf~---   95 (220)
T TIGR02495        26 CNLKCPYCH-NSELLIPRKGSGEIELEELLEFLRRRQG-----LLDGVVITGGEPTLQ-AGELGDFLREVRENLGFE---   95 (220)
T ss_pred             CCCCCCCCC-CCCCHHHHCCCCCCCHHHHHHHHHHCCC-----CEEEEEEECCCHHHH-HHHHHHHHHHHHHHCCCE---
T ss_conf             889987888-8764002005761027779999873134-----210578728753236-777899999999865927---


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHCC-CCCEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf             21133210410023477663034-54114323433201345542244313478999986302444333210002585432
Q gi|254780628|r  107 EITIEANPSSVEVNNFQGYRKAG-VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT  185 (395)
Q Consensus       107 e~t~E~~P~~~~~~~l~~l~~~G-v~RiS~GvQs~~~~~l~~~~R~~~~~~~~~~~~~~~~~~~~v~iDli~GlPgqt~e  185 (395)
T Consensus        96 -vkLdT--NG~~P~~L~~ll~~gLvD~va~D~Kap~~~y~~~~G~~~~~~~----------~~tnis-------PsrtPe  155 (220)
T TIGR02495        96 -VKLDT--NGSNPRVLEELLEEGLVDYVAMDVKAPPEKYGELYGREKNAAK----------KETNIS-------PSRTPE  155 (220)
T ss_pred             -EEEEC--CCCCHHHHHHHHHCCCCCEEEEECCCCHHHCCEEECCCCCCCC----------CCCCCC-------CCCCHH
T ss_conf             -85606--7886789999986048757875014786567400063321003----------532468-------775658


Q ss_pred             ----CCCCCHHHHHHCC----CCC
Q ss_conf             ----2111278875318----001
Q gi|254780628|r  186 ----QWEMELQRALSYA----VDH  201 (395)
Q Consensus       186 ----~~~~~l~~~~~l~----p~~  201 (395)
T Consensus       156 ~l~~~~~~SlEil~~s~GCGGi~f  179 (220)
T TIGR02495       156 KLLKNILKSLEILLESGGCGGIEF  179 (220)
T ss_pred             HHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf             999998755675542478688653