HHsearch alignment for GI: 254780628 and conserved domain: TIGR02495
>TIGR02495 NrdG2 anaerobic ribonucleoside-triphosphate reductase activating protein; InterPro: IPR012840 This enzyme is a member of the radical-SAM family. It is often gene clustered with the class III (anaerobic) ribonucleotide triphosphate reductase (NrdD, IPR009161 from INTERPRO) and presumably fulfils the identical function as NrdG , , which utilises S-adenosyl methionine, an iron-sulphur cluster and a reductant (dihydroflavodoxin) to produce a glycine-centred radical in NrdD..
Probab=97.02 E-value=0.0036 Score=41.17 Aligned_cols=144 Identities=20% Similarity=0.364 Sum_probs=91.5
Q ss_pred CCCCCCCCCCE-EEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 11837657730-24578866288999999999999987618950589996288888789999999997664047644433
Q gi|254780628|r 28 CVKKCPYCDFN-SHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVSSNV 106 (395)
Q Consensus 28 C~~~C~yC~f~-~~~~~~~~~~~~y~~~l~~Ei~~~~~~~~~~~~~~iy~GGGTPs~l~~~~l~~ll~~i~~~~~~~~~~ 106 (395)
T Consensus 26 Cn~~CpyCH-N~~~~~~~~~~~~~~~e~~~~~L~~R~~-----ll~gVVitGGEptlQ-~~eL~d~~~~v~~nlGf~--- 95 (220)
T TIGR02495 26 CNLKCPYCH-NSELLIPRKGSGEIELEELLEFLRRRQG-----LLDGVVITGGEPTLQ-AGELGDFLREVRENLGFE--- 95 (220)
T ss_pred CCCCCCCCC-CCCCHHHHCCCCCCCHHHHHHHHHHCCC-----CEEEEEEECCCHHHH-HHHHHHHHHHHHHHCCCE---
T ss_conf 889987888-8764002005761027779999873134-----210578728753236-777899999999865927---
Q ss_pred CCCCCCCCCCCHHHHHHHHHHCC-CCCEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 21133210410023477663034-54114323433201345542244313478999986302444333210002585432
Q gi|254780628|r 107 EITIEANPSSVEVNNFQGYRKAG-VNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQTMT 185 (395)
Q Consensus 107 e~t~E~~P~~~~~~~l~~l~~~G-v~RiS~GvQs~~~~~l~~~~R~~~~~~~~~~~~~~~~~~~~v~iDli~GlPgqt~e 185 (395)
T Consensus 96 -vkLdT--NG~~P~~L~~ll~~gLvD~va~D~Kap~~~y~~~~G~~~~~~~----------~~tnis-------PsrtPe 155 (220)
T TIGR02495 96 -VKLDT--NGSNPRVLEELLEEGLVDYVAMDVKAPPEKYGELYGREKNAAK----------KETNIS-------PSRTPE 155 (220)
T ss_pred -EEEEC--CCCCHHHHHHHHHCCCCCEEEEECCCCHHHCCEEECCCCCCCC----------CCCCCC-------CCCCHH
T ss_conf -85606--7886789999986048757875014786567400063321003----------532468-------775658
Q ss_pred ----CCCCCHHHHHHCC----CCC
Q ss_conf ----2111278875318----001
Q gi|254780628|r 186 ----QWEMELQRALSYA----VDH 201 (395)
Q Consensus 186 ----~~~~~l~~~~~l~----p~~ 201 (395)
T Consensus 156 ~l~~~~~~SlEil~~s~GCGGi~f 179 (220)
T TIGR02495 156 KLLKNILKSLEILLESGGCGGIEF 179 (220)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 999998755675542478688653