HHsearch alignment for GI: 254780628 and conserved domain: pfam04055
>pfam04055 Radical_SAM Radical SAM superfamily. Radical SAM proteins catalyse diverse reactions, including unusual methylations, isomerisation, sulphur insertion, ring formation, anaerobic oxidation and protein radical formation.
Probab=99.64 E-value=1.1e-15 Score=123.96 Aligned_cols=163 Identities=24% Similarity=0.380 Sum_probs=122.2
Q ss_pred ECCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCC
Q ss_conf 40651183765773024578866288999999999999987618950589996288888789999999997664047644
Q gi|254780628|r 24 HWPFCVKKCPYCDFNSHVRRYKVGQENFIQSFLTEMQWMRQLTGPRSISSIFFGGGTPSLIEPQNIALILDGIAKNWTVS 103 (395)
Q Consensus 24 hiPFC~~~C~yC~f~~~~~~~~~~~~~y~~~l~~Ei~~~~~~~~~~~~~~iy~GGGTPs~l~~~~l~~ll~~i~~~~~~~ 103 (395)
T Consensus 3 ~~~gC~~~C~fC~~~~~~-~~~~~~~~~~~~i~~~~~~~~----~~~~~~i~~~gg~p~~~~-~~~~~~~~~~~~~~--~ 74 (165)
T pfam04055 3 ITPGCNLRCTYCAFPSIR-ARGKGRELSPEEILEEAKELA----RLGVEVVILTGGEPLLLP-DLVELLERLLKLEE--L 74 (165)
T ss_pred ECCCCCCCCCCCCCCCCC-CCCCCCCCCHHHHHHHHHHHH----HCCCEEEEEECCCCCCCH-HHHHHHHHHHHHCC--C
T ss_conf 893748779689997857-888652269999999998887----459859999316766652-77777888765314--6
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 43321133210410023477663034541143234332013455422443134789999863024443332100025854
Q gi|254780628|r 104 SNVEITIEANPSSVEVNNFQGYRKAGVNRISLGVQSLEEQSLRFLGRNHNASEAIAAIHLARNIFPRMSFDLIYALPKQT 183 (395)
Q Consensus 104 ~~~e~t~E~~P~~~~~~~l~~l~~~Gv~RiS~GvQs~~~~~l~~~~R~~~~~~~~~~~~~~~~~~~~v~iDli~GlPgqt 183 (395)
T Consensus 75 ~~~~~~~~t~~~~~~~~~~~~l~~~g~~~i~~~ie~~~~~~~~~~~~~~~~~~~~~~i~~~~~~gi~~~~~~i~~~~~e~ 154 (165)
T pfam04055 75 EGIRITLETNGTLLDEELLEELKEAGLDRVSISLQSGDDEVLKIINRGHTFEEVLEALELLREAGIPVVVDNIVGLPGEN 154 (165)
T ss_pred CCEEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCC
T ss_conf 76489999851433104568999719852224635599999998579999899999999999879978899999799999
Q ss_pred CCCCCCCHHHH
Q ss_conf 32211127887
Q gi|254780628|r 184 MTQWEMELQRA 194 (395)
Q Consensus 184 ~e~~~~~l~~~ 194 (395)
T Consensus 155 ~~~~~~~~~~i 165 (165)
T pfam04055 155 DEDLEETLELL 165 (165)
T ss_pred HHHHHHHHHHC
T ss_conf 99999996039