HHsearch alignment for GI: 254780628 and conserved domain: smart00529
>smart00529 HTH_DTXR Helix-turn-helix diphteria tox regulatory element. iron dependent repressor
Probab=92.57 E-value=0.55 Score=26.70 Aligned_cols=49 Identities=10% Similarity=0.232 Sum_probs=37.0
Q ss_pred HHHHHHHCCCH--HHHHHHHHHHCCCEEEEECCEEEECHHHHHHHHHHHHH
Q ss_conf 89998838996--49999999987994985598999956758989999998
Q gi|254780628|r 344 KDWEMLAGRNL--DIECERNLQRQGFIERVQFSRLRCTQRGMTMLDSVIAN 392 (395)
Q Consensus 344 ~~~~~~fg~~~--~~~~~~~L~~~Gli~~~~~~~l~lT~~G~~~~d~I~~~ 392 (395)
T Consensus 3 ~diA~~L~vs~~sVs~~l~~L~~~Gli~~~~y~~i~LT~~G~~~A~~i~~r 53 (96)
T smart00529 3 SEIAERLNVSPPTVTQMLKKLEKDGLVEYEPYRGITLTEKGRRLARRLLRK 53 (96)
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHCCCEEECCCCCEEECHHHHHHHHHHHHH
T ss_conf 889988499916799999999988898874998978898799999999999