HHsearch results for GI: 254780628 and protein with PDBid: 3cjn_A
>3cjn_A Transcriptional regulator, MARR family; structural genomics, PSI-2, protein structure initiative; 1.95A {Silicibacter pomeroyi dss-3}
Probab=90.91 E-value=0.83 Score=24.06 Aligned_cols=69 Identities=19% Similarity=0.252 Sum_probs=51.9
Q ss_pred CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHH--HHHHHHHHHCCCEEEEEC--C----EEEECHHHHHHHHHHHHH
Q ss_conf 49999899999996562379988899988389964--999999998799498559--8----999956758989999998
Q gi|254780628|r 321 LSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQF--S----RLRCTQRGMTMLDSVIAN 392 (395)
Q Consensus 321 Ls~~e~~~e~l~~~LR~~~Gid~~~~~~~fg~~~~--~~~~~~L~~~Gli~~~~~--~----~l~lT~~G~~~~d~I~~~ 392 (395)
||..+. .++..|....|+..+.+.+..+.+-. ...++.|+++|||.+..+ | ++.+|++|+.+...+...
T Consensus 50 Lt~~q~---~iL~~l~~~~~~t~~~La~~~~~~~~~vsr~v~~L~~~glI~r~~~~~D~R~~~l~lT~~G~~~~~~~~~~ 126 (162)
T 3cjn_A 50 LSTAKM---RALAILSAKDGLPIGTLGIFAVVEQSTLSRALDGLQADGLVRREVDSDDQRSSRVYLTPAGRAVYDRLWPH 126 (162)
T ss_dssp CCHHHH---HHHHHHHHSCSEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEC--CCSSEEEEECHHHHHHHHHHHHH
T ss_pred CCHHHH---HHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEECHHHHHHHHHHHHH
T ss_conf 599999---99999984799899999999897988999999999868966885226888866767898899999999999