HHsearch results for GI: 254780628 and protein with PDBid: 3oop_A

>3oop_A LIN2960 protein; protein structure initiative, PSI-2, structural genomics, MI center for structural genomics, MCSG, unknown function; 1.78A {Listeria innocua}
Probab=92.23  E-value=0.61  Score=24.96  Aligned_cols=70  Identities=20%  Similarity=0.168  Sum_probs=53.2

Q ss_pred             ECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHH--HHHHHHHHHCCCEEEEECC------EEEECHHHHHHHHHHHH
Q ss_conf             549999899999996562379988899988389964--9999999987994985598------99995675898999999
Q gi|254780628|r  320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQFS------RLRCTQRGMTMLDSVIA  391 (395)
Q Consensus       320 ~Ls~~e~~~e~l~~~LR~~~Gid~~~~~~~fg~~~~--~~~~~~L~~~Gli~~~~~~------~l~lT~~G~~~~d~I~~  391 (395)
                      -+|..+.   .++..|....|+..+++.+..+.+-.  ....+.|++.|||++..+.      .+.+|++|+.+.+.+..
T Consensus        34 glt~~q~---~iL~~l~~~~~~t~~~La~~l~i~~~~vs~~i~~L~~~g~v~r~~~~~D~R~~~l~LT~~G~~~~~~~~~  110 (143)
T 3oop_A           34 DVTPEQW---SVLEGIEANEPISQKEIALWTKKDTPTVNRIVDVLLRKELIVREISTEDRRISLLSLTDKGRKETTELRD  110 (143)
T ss_dssp             SSCHHHH---HHHHHHHHHSSEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEC----CCSCEEEECHHHHHHHHHHHH
T ss_pred             CCCHHHH---HHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEECHHHHHHHHHHHH
T ss_conf             9999999---9999998689979999999989699799999999975677434105899894476889899999999999


Q ss_pred             H
Q ss_conf             8
Q gi|254780628|r  392 N  392 (395)
Q Consensus       392 ~  392 (395)
                      .
T Consensus       111 ~  111 (143)
T 3oop_A          111 I  111 (143)
T ss_dssp             H
T ss_pred             H
T ss_conf             9