HHsearch results for GI: 254780628 and protein with PDBid: 3oop_A
>3oop_A LIN2960 protein; protein structure initiative, PSI-2, structural genomics, MI center for structural genomics, MCSG, unknown function; 1.78A {Listeria innocua}
Probab=92.23 E-value=0.61 Score=24.96 Aligned_cols=70 Identities=20% Similarity=0.168 Sum_probs=53.2
Q ss_pred ECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHH--HHHHHHHHHCCCEEEEECC------EEEECHHHHHHHHHHHH
Q ss_conf 549999899999996562379988899988389964--9999999987994985598------99995675898999999
Q gi|254780628|r 320 FLSSEQQADEFLMMGLRLREGISVKDWEMLAGRNLD--IECERNLQRQGFIERVQFS------RLRCTQRGMTMLDSVIA 391 (395)
Q Consensus 320 ~Ls~~e~~~e~l~~~LR~~~Gid~~~~~~~fg~~~~--~~~~~~L~~~Gli~~~~~~------~l~lT~~G~~~~d~I~~ 391 (395)
-+|..+. .++..|....|+..+++.+..+.+-. ....+.|++.|||++..+. .+.+|++|+.+.+.+..
T Consensus 34 glt~~q~---~iL~~l~~~~~~t~~~La~~l~i~~~~vs~~i~~L~~~g~v~r~~~~~D~R~~~l~LT~~G~~~~~~~~~ 110 (143)
T 3oop_A 34 DVTPEQW---SVLEGIEANEPISQKEIALWTKKDTPTVNRIVDVLLRKELIVREISTEDRRISLLSLTDKGRKETTELRD 110 (143)
T ss_dssp SSCHHHH---HHHHHHHHHSSEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEC----CCSCEEEECHHHHHHHHHHHH
T ss_pred CCCHHHH---HHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEECHHHHHHHHHHHH
T ss_conf 9999999---9999998689979999999989699799999999975677434105899894476889899999999999
Q ss_pred H
Q ss_conf 8
Q gi|254780628|r 392 N 392 (395)
Q Consensus 392 ~ 392 (395)
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T Consensus 111 ~ 111 (143)
T 3oop_A 111 I 111 (143)
T ss_dssp H
T ss_pred H
T ss_conf 9