HHsearch alignment for GI: 254780629 and conserved domain: cd00515

>cd00515 HAM1 NTPase/HAM1. This family consists of the HAM1 protein and pyrophosphate-releasing xanthosine/ inosine triphosphatase. HAM1 protects the cell against mutagenesis by the base analog 6-N-hydroxylaminopurine (HAP) in E. Coli and S. cerevisiae. A Ham1-related protein from Methanococcus jannaschii is a novel NTPase that has been shown to hydrolyze nonstandard nucleotides such as XTP to XMP and ITP to IMP, but not the standard nucleotides, in the presence of Mg or Mn ions. The enzyme exists as a homodimer. The HAM1 protein may be acting as an NTPase by hydrolyzing the HAP triphosphate.
Probab=100.00  E-value=0  Score=421.02  Aligned_cols=183  Identities=45%  Similarity=0.740  Sum_probs=165.6

Q ss_pred             EEEECCCCCHHHHHHHHHHHCCCEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHCCCCH
Q ss_conf             99984992279999997300791997244478856666765545677876533113456307852012434342014451
Q gi|254780629|r    9 IVIASHNVDKIHEMDSLIMPLGIMTTSALELNLIIPEETGNSFEENAMIKSLTAAKNAGMPALSDDSGLVIDVLDGKPGI   88 (224)
Q Consensus         9 ii~aT~N~~K~~E~~~iL~~~~i~~~~~~~~~~~~peE~g~tf~eNA~~KA~~~~~~~~~pvlaDDSGL~vdaL~G~PGv   88 (224)
T Consensus         1 i~~aT~N~~K~~E~~~~l~~~~i~i~~~~~--~~~~~E~~~t~~enA~~Ka~~~~~~~~~~~iaDDSGL~v~aL~g~PGv   78 (183)
T cd00515           1 IVFATGNKGKLKEFKEILAPFGIEVVSLKD--IIDIEETGSTFEENALLKARAAAEALGLPVLADDSGLCVDALNGFPGV   78 (183)
T ss_pred             CEEEECCHHHHHHHHHHHHHCCCEEEECCC--CCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHCCCCCC
T ss_conf             999908878999999988554977985465--789988888999999999999999838986984204579987599972


Q ss_pred             HHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCEE
Q ss_conf             43443045788688899999988777521356777650689986201323421045643332499826411788572313
Q gi|254780629|r   89 HSARWAESNTGERDFDMAMQKIENALRSKFAHDPAFRSAHFISVLSLAWPDGHVENFSGKVSGIIVWPPRGQLGFGYDPI  168 (224)
Q Consensus        89 ySaR~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~R~A~f~~~~~~~~~~~~~~~f~G~~~G~I~~~prG~~GFGyDpI  168 (224)
T Consensus        79 ysar~~~~~-~d~---~~~~~ll~~l~~-----~~~r~A~f~~~l~~~~~~~~~~~f~G~~~G~I~~~~rG~~GfGyDpI  149 (183)
T cd00515          79 YSARFAGEH-DDA---ENNEKLLELLEG-----DEDRSAYFVCVIALVDPDGEPLVFEGEVEGKIVTEPRGTGGFGYDPI  149 (183)
T ss_pred             HHHHHHCCC-CHH---HHHHHHHHHHCC-----CCCCEEEEEEEEEEEECCCCEEEEEEEEEEEEEECCCCCCCCCCCCE
T ss_conf             127775447-879---999999997155-----45753999999999956995899998887999866637999898835


Q ss_pred             EEECCCCCCHHHCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf             6656998477768987850121232223323343525899999999999
Q gi|254780629|r  169 FQPNGYDRTFGEMTEEEKNGGIDSATLFSILSTDLLSHRARAFKCFVDN  217 (224)
Q Consensus       169 F~p~g~~kT~aEm~~~eKn~~~~~~~~~~~~~~~~iSHR~~Al~kl~~~  217 (224)
T Consensus       150 F~p~g~~kT~aEm~~~eKn~---------------iSHR~~A~~kl~~~  183 (183)
T cd00515         150 FIPEGYGKTFAEMSPEEKNA---------------ISHRGKALRKLKEF  183 (183)
T ss_pred             EEECCCCCCCCCCCHHHHHH---------------HCHHHHHHHHHHCC
T ss_conf             99899996530399889555---------------09899999998539