HHsearch alignment of GI: 254780629 and MMDB domain: 1k7k_A_
>1k7k_A (A:) Hypothetical protein YGGV; MAD, His-TAG, large groove, disordered Se-Met, structural genomics, putative ribosomal protein, PSI; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=0 Score=429.61 Aligned_cols=195 Identities=37% Similarity=0.558 Sum_probs=178.2
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHCCCEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHCC
Q ss_conf 77799984992279999997300791997244478856666765545677876533113456307852012434342014
Q gi|254780629|r 6 ENNIVIASHNVDKIHEMDSLIMPLGIMTTSALELNLIIPEETGNSFEENAMIKSLTAAKNAGMPALSDDSGLVIDVLDGK 85 (224)
Q Consensus 6 ~~kii~aT~N~~K~~E~~~iL~~~~i~~~~~~~~~~~~peE~g~tf~eNA~~KA~~~~~~~~~pvlaDDSGL~vdaL~G~ 85 (224)
.++|+|||+|+||++|++.+|.+++++++++.++++++|||||.||++||+.||++++++++.|||||||||||+||||+
T Consensus 23 ~mki~~aT~N~~K~~E~~~iL~~~~iei~~l~~~~~~~~ee~g~t~~enA~~KA~~~~~~~~~pviaDDSGL~i~aL~g~ 102 (221)
T 1k7k_A 23 XQKVVLATGNVGKVRELASLLSDFGLDIVAQTDLGVDSAEETGLTFIENAILKARHAAKVTALPAIADDSGLAVDVLGGA 102 (221)
T ss_dssp CEEEEESCCCHHHHHHHHHHHGGGTEEEEETTTTTCCCCCCCCSSHHHHHHHHHHHHHHHHSSCEEEEEEEEEEGGGTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHHHCCCEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCEEEEEEECCC
T ss_conf 98899993987899999997323498798612149887776771068888995999986058875970657999440699
Q ss_pred CCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCC--CCCEEEEEEEEEEEEEECCCCCCCC
Q ss_conf 45143443045788688899999988777521356777650689986201323--4210456433324998264117885
Q gi|254780629|r 86 PGIHSARWAESNTGERDFDMAMQKIENALRSKFAHDPAFRSAHFISVLSLAWP--DGHVENFSGKVSGIIVWPPRGQLGF 163 (224)
Q Consensus 86 PGvySaR~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~R~A~f~~~~~~~~~--~~~~~~f~G~~~G~I~~~prG~~GF 163 (224)
|||||+||++....+.+ .+++++..+.. .+.++|+|+|+|++|+++| ++.+.+|+|+|+|.|+.+|||++||
T Consensus 103 PGvys~r~~~~~~~~~~---~~~~Ll~~l~~---~~~~~R~A~f~~~i~~~~p~~~~~~~~f~G~~~G~I~~~prG~~gf 176 (221)
T 1k7k_A 103 PGIYSARYSGEDATDQK---NLQKLLETXKD---VPDDQRQARFHCVLVYLRHAEDPTPLVCHGSWPGVITREPAGTGGF 176 (221)
T ss_dssp BGGGSTTTTCTTCCHHH---HHHHHHHHTTT---SCGGGCEEEEEEEEEEESSTTCSSCEEEEEEEEEEECSSCCCCSSS
T ss_pred CCCHHHHHHCCCCCHHH---HHHHHHHHHHC---CCCCCCEEEEEEEEEEECCCCCCCEEEEEEEECCEEEEEECCCCCC
T ss_conf 70142998644686899---99999998647---8823124769999998626789806889988635796401588998
Q ss_pred CCCEEEEECCCCCCHHHCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 7231366569984777689878501212322233233435258999999999999876
Q gi|254780629|r 164 GYDPIFQPNGYDRTFGEMTEEEKNGGIDSATLFSILSTDLLSHRARAFKCFVDNCLRI 221 (224)
Q Consensus 164 GyDpIF~p~g~~kT~aEm~~~eKn~~~~~~~~~~~~~~~~iSHR~~Al~kl~~~l~~~ 221 (224)
||||||+|+|+++|||||+.+|||+ ||||++|+++|+++|.+.
T Consensus 177 GyD~IFip~g~~kT~AEl~~~eKn~---------------iSHR~~A~~~l~~~L~~~ 219 (221)
T 1k7k_A 177 GYDPIFFVPSEGKTAAELTREEKSA---------------ISHRGQALKLLLDALRNG 219 (221)
T ss_dssp TTGGGEEEGGGTEEGGGSCHHHHHH---------------HSHHHHHHHHHHHHHHCC
T ss_pred CCCEEEEECCCCCCHHHCCHHHHHH---------------CCHHHHHHHHHHHHHHHC
T ss_conf 8573688799997553299989666---------------298999999999999855