Query gi|254780629|ref|YP_003065042.1| putative deoxyribonucleotide triphosphate pyrophosphatase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 224
No_of_seqs 123 out of 2560
Neff 6.5
Searched_HMMs 33803
Date Wed Jun 1 15:05:21 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780629.hhm -d /home/congqian_1/database/mmdb/mmdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 >1k7k_A Hypothetical protein Y 100.0 0 0 429.6 17.1 195 6-221 23-219 (221)
2 >1vp2_A Putative xanthosine tr 100.0 0 0 411.7 14.7 193 3-224 12-205 (208)
3 >1v7r_A Hypothetical protein P 100.0 0 0 405.8 19.3 186 7-224 1-186 (186)
4 >2car_A Inosine triphosphate p 100.0 0 0 407.4 13.9 189 2-222 5-195 (196)
5 >1b78_A Pyrophosphatase; struc 100.0 0 0 398.6 14.6 189 1-221 1-192 (193)
6 >2p5x_A ASMTL, N-acetylseroton 94.5 0.35 1E-05 27.1 9.6 111 4-140 1-123 (230)
7 >1ex2_A Protein MAF; structura 93.9 0.35 1E-05 27.1 7.5 115 5-149 1-122 (189)
8 >2amh_A Septum formation prote 93.0 0.66 2E-05 25.5 10.8 117 6-148 9-142 (207)
9 >2vvp_A Ribose-5-phosphate iso 88.8 1.5 4.4E-05 23.5 6.2 84 4-91 1-88 (132)
10 >1zwy_A Hypothetical UPF0244 p 82.7 2.4 7.1E-05 22.2 4.7 63 1-65 7-76 (185)
11 >3brc_A Conserved protein of u 79.8 1.4 4E-05 23.7 2.6 57 7-67 1-57 (120)
12 >2ppw_A Conserved domain prote 58.5 14 0.00041 17.8 6.8 84 5-91 2-94 (216)
13 >1u14_A Hypothetical UPF0244 p 55.9 15 0.00045 17.6 4.0 57 6-65 2-66 (172)
14 >1o1x_A Ribose-5-phosphate iso 52.2 18 0.00052 17.2 7.6 83 4-91 10-96 (141)
15 >3he8_A Ribose-5-phosphate iso 49.1 20 0.00058 16.9 7.1 80 7-91 1-84 (128)
16 >2c0r_A PSAT, phosphoserine am 43.9 10 0.0003 18.6 1.3 19 202-220 26-44 (73)
17 >1w23_A Phosphoserine aminotra 33.4 18 0.00053 17.1 1.2 18 203-220 27-44 (73)
18 >1bjn_A PSAT, phosphoserine am 33.2 18 0.00054 17.1 1.2 19 202-220 26-44 (73)
19 >3c5y_A Ribose/galactose isome 33.0 36 0.0011 15.4 6.8 84 5-91 18-110 (231)
20 >1mio_A Nitrogenase molybdenum 31.3 38 0.0011 15.2 4.4 29 8-36 32-60 (107)
21 >1srr_A SPO0F, sporulation res 27.7 44 0.0013 14.9 3.6 33 4-36 1-33 (124)
22 >1mio_B Nitrogenase molybdenum 26.7 46 0.0014 14.8 3.9 24 13-36 70-93 (160)
23 >1c01_A Antimicrobial peptide 26.6 29 0.00085 16.0 1.3 35 137-171 28-75 (76)
24 >2vvr_A Ribose-5-phosphate iso 25.8 48 0.0014 14.7 7.5 81 6-91 1-85 (130)
25 >2qzj_A Two-component response 25.4 49 0.0014 14.6 4.7 79 4-82 2-94 (136)
26 >1qgu_B Protein (nitrogenase m 23.1 40 0.0012 15.1 1.5 53 5-57 7-71 (83)
27 >1zjj_A Hypothetical protein P 22.7 55 0.0016 14.3 2.4 29 5-33 32-61 (131)
No 1
>>1k7k_A Hypothetical protein YGGV; MAD, His-TAG, large groove, disordered Se-Met, structural genomics, putative ribosomal protein, PSI; HET: MSE; 1.50A {Escherichia coli} (A:)
Probab=100.00 E-value=0 Score=429.61 Aligned_cols=195 Identities=37% Similarity=0.558 Sum_probs=178.2
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHCCCEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHCC
Q ss_conf 77799984992279999997300791997244478856666765545677876533113456307852012434342014
Q gi|254780629|r 6 ENNIVIASHNVDKIHEMDSLIMPLGIMTTSALELNLIIPEETGNSFEENAMIKSLTAAKNAGMPALSDDSGLVIDVLDGK 85 (224)
Q Consensus 6 ~~kii~aT~N~~K~~E~~~iL~~~~i~~~~~~~~~~~~peE~g~tf~eNA~~KA~~~~~~~~~pvlaDDSGL~vdaL~G~ 85 (224)
.++|+|||+|+||++|++.+|.+++++++++.++++++|||||.||++||+.||++++++++.|||||||||||+||||+
T Consensus 23 ~mki~~aT~N~~K~~E~~~iL~~~~iei~~l~~~~~~~~ee~g~t~~enA~~KA~~~~~~~~~pviaDDSGL~i~aL~g~ 102 (221)
T 1k7k_A 23 XQKVVLATGNVGKVRELASLLSDFGLDIVAQTDLGVDSAEETGLTFIENAILKARHAAKVTALPAIADDSGLAVDVLGGA 102 (221)
T ss_dssp CEEEEESCCCHHHHHHHHHHHGGGTEEEEETTTTTCCCCCCCCSSHHHHHHHHHHHHHHHHSSCEEEEEEEEEEGGGTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHHHCCCEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCEEEEEEECCC
T ss_conf 98899993987899999997323498798612149887776771068888995999986058875970657999440699
Q ss_pred CCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCC--CCCEEEEEEEEEEEEEECCCCCCCC
Q ss_conf 45143443045788688899999988777521356777650689986201323--4210456433324998264117885
Q gi|254780629|r 86 PGIHSARWAESNTGERDFDMAMQKIENALRSKFAHDPAFRSAHFISVLSLAWP--DGHVENFSGKVSGIIVWPPRGQLGF 163 (224)
Q Consensus 86 PGvySaR~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~R~A~f~~~~~~~~~--~~~~~~f~G~~~G~I~~~prG~~GF 163 (224)
|||||+||++....+.+ .+++++..+.. .+.++|+|+|+|++|+++| ++.+.+|+|+|+|.|+.+|||++||
T Consensus 103 PGvys~r~~~~~~~~~~---~~~~Ll~~l~~---~~~~~R~A~f~~~i~~~~p~~~~~~~~f~G~~~G~I~~~prG~~gf 176 (221)
T 1k7k_A 103 PGIYSARYSGEDATDQK---NLQKLLETXKD---VPDDQRQARFHCVLVYLRHAEDPTPLVCHGSWPGVITREPAGTGGF 176 (221)
T ss_dssp BGGGSTTTTCTTCCHHH---HHHHHHHHTTT---SCGGGCEEEEEEEEEEESSTTCSSCEEEEEEEEEEECSSCCCCSSS
T ss_pred CCCHHHHHHCCCCCHHH---HHHHHHHHHHC---CCCCCCEEEEEEEEEEECCCCCCCEEEEEEEECCEEEEEECCCCCC
T ss_conf 70142998644686899---99999998647---8823124769999998626789806889988635796401588998
Q ss_pred CCCEEEEECCCCCCHHHCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 7231366569984777689878501212322233233435258999999999999876
Q gi|254780629|r 164 GYDPIFQPNGYDRTFGEMTEEEKNGGIDSATLFSILSTDLLSHRARAFKCFVDNCLRI 221 (224)
Q Consensus 164 GyDpIF~p~g~~kT~aEm~~~eKn~~~~~~~~~~~~~~~~iSHR~~Al~kl~~~l~~~ 221 (224)
||||||+|+|+++|||||+.+|||+ ||||++|+++|+++|.+.
T Consensus 177 GyD~IFip~g~~kT~AEl~~~eKn~---------------iSHR~~A~~~l~~~L~~~ 219 (221)
T 1k7k_A 177 GYDPIFFVPSEGKTAAELTREEKSA---------------ISHRGQALKLLLDALRNG 219 (221)
T ss_dssp TTGGGEEEGGGTEEGGGSCHHHHHH---------------HSHHHHHHHHHHHHHHCC
T ss_pred CCCEEEEECCCCCCHHHCCHHHHHH---------------CCHHHHHHHHHHHHHHHC
T ss_conf 8573688799997553299989666---------------298999999999999855
No 2
>>1vp2_A Putative xanthosine triphosphate pyrophosphatase/HAM1 protein homolog; TM0159; 1.78A {Thermotoga maritima} (A:)
Probab=100.00 E-value=0 Score=411.73 Aligned_cols=193 Identities=33% Similarity=0.510 Sum_probs=170.0
Q ss_pred CCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHH
Q ss_conf 65677799984992279999997300791997244478856666765545677876533113456307852012434342
Q gi|254780629|r 3 KLIENNIVIASHNVDKIHEMDSLIMPLGIMTTSALELNLIIPEETGNSFEENAMIKSLTAAKNAGMPALSDDSGLVIDVL 82 (224)
Q Consensus 3 ~~~~~kii~aT~N~~K~~E~~~iL~~~~i~~~~~~~~~~~~peE~g~tf~eNA~~KA~~~~~~~~~pvlaDDSGL~vdaL 82 (224)
+|.+++|+|||+|+||++|++.+| +.+++++.+. +..+|+|++.||++||++||+++++.++.|||||||||||+||
T Consensus 12 ~m~km~i~~aT~N~~K~~E~~~iL-~~~~~i~~~~--~~~~~~E~~~t~~enA~~KA~~~~~~~~~pvi~dDSGL~i~aL 88 (208)
T 1vp2_A 12 HMKKLTVYLATTNPHKVEEIKMIA-PEWMEILPSP--EKIEVVEDGETFLENSVKKAVVYGKKLKHPVMADDSGLVIYSL 88 (208)
T ss_dssp ---CEEEEESCCCHHHHHHHHTTC-CTTEEEEECS--SCCCCCCCCSSHHHHHHHHHHHHHHHHCSCEEEEEEEEEEGGG
T ss_pred CCCCCEEEEECCCHHHHHHHHHHH-CCCCEEEECC--CCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCEEEEHHH
T ss_conf 635777999959889999999984-0598883046--4577776683588888765430013344237872435410224
Q ss_pred HCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCC-CEEEEEEEEEEEEEECCCCCC
Q ss_conf 0144514344304578868889999998877752135677765068998620132342-104564333249982641178
Q gi|254780629|r 83 DGKPGIHSARWAESNTGERDFDMAMQKIENALRSKFAHDPAFRSAHFISVLSLAWPDG-HVENFSGKVSGIIVWPPRGQL 161 (224)
Q Consensus 83 ~G~PGvySaR~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~R~A~f~~~~~~~~~~~-~~~~f~G~~~G~I~~~prG~~ 161 (224)
||+|||||+||+++...+.. ++.++..+.. .+|+|+|+|++|++++++ .+++|+|+|+|+|+.+|||++
T Consensus 89 ~g~PGiys~r~~~~~~~~~~----~~~ll~~l~~------~~r~A~~~~~i~~~~~~g~~~~~f~G~~~G~I~~~prG~~ 158 (208)
T 1vp2_A 89 GGFPGVMSARFMEEHSYKEK----MRTILKMLEG------KDRRAAFVCSATFFDPVENTLISVEDRVEGRIANEIRGTG 158 (208)
T ss_dssp TTEEGGGTTTTTTTSCHHHH----HHHHHHHTTT------SCCEEEEEEEEEEEETTTTEEEEEEEEEEEEECSSCCCSC
T ss_pred HHHHHHHHHHHHHCCCCCHH----HHHHHHHCCC------CCCCCCEEEEEEEEEECCCCEEEEEEEEECCEEECCCCCC
T ss_conf 44367889999860784125----7889874236------5554220212454420244204683247517887156899
Q ss_pred CCCCCEEEEECCCCCCHHHCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
Q ss_conf 857231366569984777689878501212322233233435258999999999999876449
Q gi|254780629|r 162 GFGYDPIFQPNGYDRTFGEMTEEEKNGGIDSATLFSILSTDLLSHRARAFKCFVDNCLRIDEK 224 (224)
Q Consensus 162 GFGyDpIF~p~g~~kT~aEm~~~eKn~~~~~~~~~~~~~~~~iSHR~~Al~kl~~~l~~~~e~ 224 (224)
||||||||+|+|+++|||||+ +|||+ ||||++|+++|+++|.++.++
T Consensus 159 gfGyD~iFip~g~~kT~aEm~-~eKn~---------------iShR~~A~~~l~~~L~~~~~~ 205 (208)
T 1vp2_A 159 GFGYDPFFIPDGYDKTFGEIP-HLKEK---------------ISHRSKAFRKLFSVLEKILES 205 (208)
T ss_dssp SSTTGGGEEETTCSSCTTTCG-GGHHH---------------HSHHHHHHHHHHHHHHHHC--
T ss_pred CCCCCEEEEECCCCCCHHHCH-HHHHH---------------CCHHHHHHHHHHHHHHHHHHH
T ss_conf 999675999899997366497-77876---------------598999999999999999864
No 3
>>1v7r_A Hypothetical protein PH1917; ntpase, structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; HET: CIT; 1.40A {Pyrococcus horikoshii OT3} (A:)
Probab=100.00 E-value=0 Score=405.84 Aligned_cols=186 Identities=32% Similarity=0.427 Sum_probs=170.1
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHCCC
Q ss_conf 77999849922799999973007919972444788566667655456778765331134563078520124343420144
Q gi|254780629|r 7 NNIVIASHNVDKIHEMDSLIMPLGIMTTSALELNLIIPEETGNSFEENAMIKSLTAAKNAGMPALSDDSGLVIDVLDGKP 86 (224)
Q Consensus 7 ~kii~aT~N~~K~~E~~~iL~~~~i~~~~~~~~~~~~peE~g~tf~eNA~~KA~~~~~~~~~pvlaDDSGL~vdaL~G~P 86 (224)
+||+|||+|+||++|++++|.+++++++++ ++++|||||.||++||+.||+++++.++.|||||||||||+||||+|
T Consensus 1 Mki~~aT~N~~K~~E~~~~L~~~~i~v~~~---~~~~~ee~~~t~~enA~~KA~~~~~~~~~pviadDsGL~i~aL~g~P 77 (186)
T 1v7r_A 1 MKIFFITSNPGKVREVANFLGTFGIEIVQL---KHEYPEIQAEKLEDVVDFGISWLKGKVPEPFMIEDSGLFIESLKGFP 77 (186)
T ss_dssp CEEEEECSCHHHHHHHHHHHHTTTCEEEEE---CCCCCCCCCSSHHHHHHHHHHHHTTTSCSSEEEEEEEEEEGGGTTTB
T ss_pred CEEEEECCCHHHHHHHHHHHHHCCCEEEEC---CCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHCCCCC
T ss_conf 979998699899999999860659769865---76576545631778999999876533020266152110234307855
Q ss_pred CHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEEEEEEEEECCCCCCCCCCC
Q ss_conf 51434430457886888999999887775213567776506899862013234210456433324998264117885723
Q gi|254780629|r 87 GIHSARWAESNTGERDFDMAMQKIENALRSKFAHDPAFRSAHFISVLSLAWPDGHVENFSGKVSGIIVWPPRGQLGFGYD 166 (224)
Q Consensus 87 GvySaR~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~R~A~f~~~~~~~~~~~~~~~f~G~~~G~I~~~prG~~GFGyD 166 (224)
||||+||++... .+++++.+.. ..+|+|+|+|++|+++++ .+.+|+|.|+|.|+.+|||++|||||
T Consensus 78 Gv~s~r~~~~~~--------~~~ll~~l~~-----~~~R~A~~~~~i~~~~~~-~~~~f~G~~~G~I~~~~rG~~gfGyD 143 (186)
T 1v7r_A 78 GVYSSYVYRTIG--------LEGILKLMEG-----AEDRRAYFKSVIGFYIDG-KAYKFSGVTWGRISNEKRGTHGFGYD 143 (186)
T ss_dssp GGGHHHHHHHTH--------HHHHHHHTTT-----CSCCEEEEEEEEEEEETT-EEEEEEEEEEEEECSSCCCSSSCTTG
T ss_pred CCCCHHHHHHHH--------HHHHHHHCCC-----CHHHHHHHHHHHCCCCCC-CEEEEEEEEEEEEEECCCCCCCCCCC
T ss_conf 321366776567--------7678886025-----045678886410124787-24898422401476446577888845
Q ss_pred EEEEECCCCCCHHHCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
Q ss_conf 1366569984777689878501212322233233435258999999999999876449
Q gi|254780629|r 167 PIFQPNGYDRTFGEMTEEEKNGGIDSATLFSILSTDLLSHRARAFKCFVDNCLRIDEK 224 (224)
Q Consensus 167 pIF~p~g~~kT~aEm~~~eKn~~~~~~~~~~~~~~~~iSHR~~Al~kl~~~l~~~~e~ 224 (224)
|||+|+|+++|||||+.+|||+ +|||++|+++|+++|.+..++
T Consensus 144 ~iF~p~g~~kT~aEl~~~eK~~---------------iShR~~A~~~l~~~l~~~~~q 186 (186)
T 1v7r_A 144 PIFIPEGSEKTFAEMTIEEKNA---------------LSHRGKALKAFFEWLKVNLKY 186 (186)
T ss_dssp GGEEETTCSSCGGGSCHHHHHT---------------TSHHHHHHHHHHHHHHHHHCC
T ss_pred EEEEECCCCCCCEECCHHHHHH---------------CCHHHHHHHHHHHHHHHHHCC
T ss_conf 1667489996431199999643---------------599999999999999997478
No 4
>>2car_A Inosine triphosphate pyrophosphatase; hydrolase, inosine triphosphate pyrophosphohydrolase, inosine triphosphatase deficiency, ITP, IMP; 1.09A {Homo sapiens} (A:)
Probab=100.00 E-value=0 Score=407.37 Aligned_cols=189 Identities=29% Similarity=0.411 Sum_probs=169.3
Q ss_pred CCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECHHHHHHH
Q ss_conf 66567779998499227999999730079199724447885666676554567787653311345630785201243434
Q gi|254780629|r 2 RKLIENNIVIASHNVDKIHEMDSLIMPLGIMTTSALELNLIIPEETGNSFEENAMIKSLTAAKNAGMPALSDDSGLVIDV 81 (224)
Q Consensus 2 ~~~~~~kii~aT~N~~K~~E~~~iL~~~~i~~~~~~~~~~~~peE~g~tf~eNA~~KA~~~~~~~~~pvlaDDSGL~vda 81 (224)
|+|||++|+|||+|+||++|++.+|.++++.++.+.+++ ++|++.||+|||++||+++++.++.|||||||||||+|
T Consensus 5 ~~~~~~~i~~aT~N~~K~~E~~~il~~~~~~~i~~~~~d---~~E~~~t~~enA~~KA~~~~~~~~~pviaDDSGL~i~a 81 (196)
T 2car_A 5 ASLVGKKIVFVTGNAKKLEEVVQILGDKFPCTLVAQKID---LPEYQGEPDEISIQKCQEAVRQVQGPVLVEDTCLCFNA 81 (196)
T ss_dssp HHHTTCEEEEECSCHHHHHHHHHHHCTTCCSEEEEECCC---CCCBCSCHHHHHHHHHHHHHHHHSSCEEEEEEEEEEGG
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEECHHCCC---CCCCCCCHHHHHHHHHHHHHHHHHHHHEECCHHHHHHH
T ss_conf 433499799983998999999998315077010320179---88768861788887667777766555200002546767
Q ss_pred HHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCC--CCCEEEEEEEEEEEEEECCCC
Q ss_conf 201445143443045788688899999988777521356777650689986201323--421045643332499826411
Q gi|254780629|r 82 LDGKPGIHSARWAESNTGERDFDMAMQKIENALRSKFAHDPAFRSAHFISVLSLAWP--DGHVENFSGKVSGIIVWPPRG 159 (224)
Q Consensus 82 L~G~PGvySaR~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~R~A~f~~~~~~~~~--~~~~~~f~G~~~G~I~~~prG 159 (224)
|||+|||||+||++.. ..+++++.+.. ..+|+|+|+|+++++++ ++.+.+|+|.|+|.|+ +|||
T Consensus 82 L~g~PGvys~r~~~~~--------~~~~ll~~l~~-----~~~r~a~~~~~~~~~~~~~~~~~~~f~G~~~G~I~-e~rG 147 (196)
T 2car_A 82 LGGLPGPYIKWFLEKL--------KPEGLHQLLAG-----FEDKSAYALCTFALSTGDPSQPVRLFRGRTSGRIV-APRG 147 (196)
T ss_dssp GTTCEETTHHHHHHHH--------HHHHHHHTTTT-----CSCCEEEEEEEEEEECSCSSCCCEEEEEEEEEEEC-SCCS
T ss_pred HHHHHHHHHHHHHHHH--------HHHHHHHHHHC-----CCCCCCEEEEEEEEEECCCCCCCEEEEEEECCCCC-CCCC
T ss_conf 7655678869999851--------03667777405-----65454226899998604568873389987424112-2424
Q ss_pred CCCCCCCEEEEECCCCCCHHHCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 788572313665699847776898785012123222332334352589999999999998764
Q gi|254780629|r 160 QLGFGYDPIFQPNGYDRTFGEMTEEEKNGGIDSATLFSILSTDLLSHRARAFKCFVDNCLRID 222 (224)
Q Consensus 160 ~~GFGyDpIF~p~g~~kT~aEm~~~eKn~~~~~~~~~~~~~~~~iSHR~~Al~kl~~~l~~~~ 222 (224)
++||||||||+|+|+++|||||+.+|||+ +|||++|+++|+++|.++.
T Consensus 148 ~~gfGyDpiF~p~g~~kT~aEl~~~eK~~---------------iSHR~~A~~~l~~~L~ei~ 195 (196)
T 2car_A 148 CQDFGWDPCFQPDGYEQTYAEMPKAEKNA---------------VSHRFRALLELQEYFGSLA 195 (196)
T ss_dssp CTTSTTGGGEEETTCSSCTTTSCHHHHHH---------------HCHHHHHHHHHHHHHCSSC
T ss_pred CCCCCCCCEEECCCCCCCHHHCCHHHHHH---------------CCHHHHHHHHHHHHHHHHC
T ss_conf 68899870676089995453099999754---------------3999999999999999701
No 5
>>1b78_A Pyrophosphatase; structural genomics, hyperthermal protein; 2.20A {Methanococcus jannaschii} (A:)
Probab=100.00 E-value=0 Score=398.58 Aligned_cols=189 Identities=30% Similarity=0.395 Sum_probs=167.9
Q ss_pred CCCC--CCCEEEEECCCCCHHHHHHHHHHHCCCEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECHHHH
Q ss_conf 9665--67779998499227999999730079199724447885666676554567787653311345630785201243
Q gi|254780629|r 1 MRKL--IENNIVIASHNVDKIHEMDSLIMPLGIMTTSALELNLIIPEETGNSFEENAMIKSLTAAKNAGMPALSDDSGLV 78 (224)
Q Consensus 1 m~~~--~~~kii~aT~N~~K~~E~~~iL~~~~i~~~~~~~~~~~~peE~g~tf~eNA~~KA~~~~~~~~~pvlaDDSGL~ 78 (224)
|++. ||++|+|||+|+||++|++++|.++++.++.+.+++ ++|++.||++||+.||++++++++.||||||||||
T Consensus 1 m~~~~~~m~ki~~aT~N~~K~~E~~~il~~~~~~~i~~~~~d---~~E~~~t~~enA~~KA~~~~~~~~~pvi~dDsGL~ 77 (193)
T 1b78_A 1 MQRTLGEIMKIYFATGNPNKIKEANIILKDLKDVEIEQIKIS---YPEIQGTLEEVAEFGAKWVYNILKKPVIVEDSGFF 77 (193)
T ss_dssp ---------CEEEECSCHHHHHHHHHHTTTCTTCCEEEECCC---CCCBSSCHHHHHHHHHHHHHHHHCSCEEEEEEEEE
T ss_pred CCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCHHCCCC---CCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCHHH
T ss_conf 963404740799988987899999998755787420213768---86446525677788899887521332785061114
Q ss_pred HHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEEEEEEEEECCC
Q ss_conf 43420144514344304578868889999998877752135677765068998620132342104564333249982641
Q gi|254780629|r 79 IDVLDGKPGIHSARWAESNTGERDFDMAMQKIENALRSKFAHDPAFRSAHFISVLSLAWPDGHVENFSGKVSGIIVWPPR 158 (224)
Q Consensus 79 vdaL~G~PGvySaR~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~R~A~f~~~~~~~~~~~~~~~f~G~~~G~I~~~pr 158 (224)
|+||||+|||||+||++... .+++++.+.. .++|+|+|+|++|+++++ .+++|+|.++|.|+.+|+
T Consensus 78 i~aL~g~PG~ys~~~~~~~~--------~~~ll~~l~~-----~~~R~A~~~~~i~~~~~~-~~~~f~G~~~G~I~~~~~ 143 (193)
T 1b78_A 78 VEALNGFPGTYSKFVQETIG--------NEGILKLLEG-----KDNRNAYFKTVIGYCDEN-GVRLFKGIVKGRVSEEIR 143 (193)
T ss_dssp EGGGTTCEETTHHHHHHHTH--------HHHHHHHHTT-----CSCCEEEEEEEEEEEETT-EEEEEEEEEEEEECSSCC
T ss_pred HHHHHHHHHHHHHHHHHHCC--------CHHHHHHHHH-----HHHHHHHHHHHHHHCCCC-CEEEEEEEEEEEEEEEEC
T ss_conf 66775444566199887578--------5999998641-----012556750232320158-506898999999997006
Q ss_pred CC-CCCCCCEEEEECCCCCCHHHCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 17-8857231366569984777689878501212322233233435258999999999999876
Q gi|254780629|r 159 GQ-LGFGYDPIFQPNGYDRTFGEMTEEEKNGGIDSATLFSILSTDLLSHRARAFKCFVDNCLRI 221 (224)
Q Consensus 159 G~-~GFGyDpIF~p~g~~kT~aEm~~~eKn~~~~~~~~~~~~~~~~iSHR~~Al~kl~~~l~~~ 221 (224)
|. +||||||||+|+|+++|||||+.+|||+ ||||++|+++|+++|.+.
T Consensus 144 g~~~gfGyD~iF~p~g~~kT~aEl~~~eKn~---------------iShR~~Al~kl~~~l~~~ 192 (193)
T 1b78_A 144 SKGYGFAYDSIFIPEEEERTFAEMTTEEKSQ---------------ISHRKKAFEEFKKFLLDR 192 (193)
T ss_dssp CSSCCSGGGGSEEETTCSSCGGGSCHHHHTT---------------TSHHHHHHHHHHHHHHTC
T ss_pred CCCCCCCCCCEEEECCCCCCCCCCCHHHHHH---------------CCHHHHHHHHHHHHHHHH
T ss_conf 8988988760588689996431199889444---------------499999999999999853
No 6
>>2p5x_A ASMTL, N-acetylserotonin O-methyltransferase-like protein; structural genomics, structural genomics consortium, SGC, unknown function; 2.00A {Homo sapiens} (A:)
Probab=94.49 E-value=0.35 Score=27.06 Aligned_cols=111 Identities=15% Similarity=0.137 Sum_probs=61.2
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEHHHCCCCCCCCCC----CCHHHHHHHHHHHHCCCC-------CCEEEE
Q ss_conf 567779998499227999999730079199724447885666676----554567787653311345-------630785
Q gi|254780629|r 4 LIENNIVIASHNVDKIHEMDSLIMPLGIMTTSALELNLIIPEETG----NSFEENAMIKSLTAAKNA-------GMPALS 72 (224)
Q Consensus 4 ~~~~kii~aT~N~~K~~E~~~iL~~~~i~~~~~~~~~~~~peE~g----~tf~eNA~~KA~~~~~~~-------~~pvla 72 (224)
||+.+|++||+-+.-.+=++++ .+.+.+++ .+++...+.... .-....|..||+.++++. +..||+
T Consensus 1 l~~~~iILaS~SprR~elL~~~--gi~f~v~~-~~iDE~~~~~~~~~p~~~v~~lA~~KA~~v~~~~~~~~~~~~~iVI~ 77 (230)
T 2p5x_A 1 LLHKRVVLASASPRRQEILSNA--GLRFEVVP-SKFKEKLDKASFATPYGYAMETAKQKALEVANRLYQKDLRAPDVVIG 77 (230)
T ss_dssp CTTSCEEECCCCHHHHHHHHHT--TCCCEECC-CCCCCCCCGGGSSSHHHHHHHHHHHHHHHHHHHHHHHHSCCCSEEEE
T ss_pred CCCCCEEEECCCHHHHHHHHHC--CCCEEEEC-CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
T ss_conf 9978889947999999999868--99829956-89899987435588589999999877777765432014788768993
Q ss_pred ECHHHHHHHH-HCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCC
Q ss_conf 2012434342-0144514344304578868889999998877752135677765068998620132342
Q gi|254780629|r 73 DDSGLVIDVL-DGKPGIHSARWAESNTGERDFDMAMQKIENALRSKFAHDPAFRSAHFISVLSLAWPDG 140 (224)
Q Consensus 73 DDSGL~vdaL-~G~PGvySaR~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~R~A~f~~~~~~~~~~~ 140 (224)
-|+=..++.- -|.|. +.+ .+.+.+ ..+ ..++-.+.|.+|++.++.
T Consensus 78 aDTvv~~~g~I~~KP~-----------~~e---eA~~~L-~~l--------sg~~h~v~T~v~i~~~~~ 123 (230)
T 2p5x_A 78 ADTIVTVGGLILEKPV-----------DKQ---DAYRML-SRL--------SGREHSVFTGVAIVHCSS 123 (230)
T ss_dssp EEEEEEETTEEECCCS-----------SHH---HHHHHH-HHH--------TTSEEEEEEEEEEEEEEE
T ss_pred CCCCEEECCCCCCCCC-----------CHH---HHHHHH-HHH--------CCCCCCEEEEEEEEEECC
T ss_conf 3750100574356988-----------778---997547-762--------598742067899997058
No 7
>>1ex2_A Protein MAF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: SUC PO4; 1.85A {Bacillus subtilis} (A:)
Probab=93.89 E-value=0.35 Score=27.10 Aligned_cols=115 Identities=19% Similarity=0.186 Sum_probs=63.9
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHCCC--EEEEHHHCCCCCCCCCC----CCHHHHHHHHHHHHCCCC-CCEEEEECHHH
Q ss_conf 677799984992279999997300791--99724447885666676----554567787653311345-63078520124
Q gi|254780629|r 5 IENNIVIASHNVDKIHEMDSLIMPLGI--MTTSALELNLIIPEETG----NSFEENAMIKSLTAAKNA-GMPALSDDSGL 77 (224)
Q Consensus 5 ~~~kii~aT~N~~K~~E~~~iL~~~~i--~~~~~~~~~~~~peE~g----~tf~eNA~~KA~~~~~~~-~~pvlaDDSGL 77 (224)
|.++|++||+-+--.+ +|+.+|+ ++.+ .++ +|....+ .-....|..||+.+++.. +..+|+-|+-.
T Consensus 1 M~~~iILaS~Sp~R~~----lL~~~g~~f~v~~-~~i--dE~~~~~~~p~~~~~~lA~~KA~~v~~~~~~~~iI~aDtvv 73 (189)
T 1ex2_A 1 MTKPLILASQSPRRKE----LLDLLQLPYSIIV-SEV--EEKLNRNFSPEENVQWLAKQKAKAVADLHPHAIVIGADTMV 73 (189)
T ss_dssp CCCCEEECCCCHHHHH----HHHTTCCCCEECC-CCC--CCCCCTTSCHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEEE
T ss_pred CCCCEEEECCCHHHHH----HHHHCCCCEEEEC-CCC--CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECEEE
T ss_conf 9999999579999999----9997799819967-998--98999879989999999999999999678998699727499
Q ss_pred HHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEEE
Q ss_conf 343420144514344304578868889999998877752135677765068998620132342104564333
Q gi|254780629|r 78 VIDVLDGKPGIHSARWAESNTGERDFDMAMQKIENALRSKFAHDPAFRSAHFISVLSLAWPDGHVENFSGKV 149 (224)
Q Consensus 78 ~vdaL~G~PGvySaR~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~R~A~f~~~~~~~~~~~~~~~f~G~~ 149 (224)
. ++|.. .++..+.+ .+.+.+ ..+ ..+...+.|.+|+..++ ....+....
T Consensus 74 ~---~~~~i-------~~KP~~~~---eA~~~L-~~l--------sg~~h~v~T~v~i~~~~-~~~~~~~~t 122 (189)
T 1ex2_A 74 C---LDGEC-------LGKPQDQE---EAASML-RRL--------SGRSHSVITAVSIQAEN-HSETFYDKT 122 (189)
T ss_dssp E---ETTEE-------ECCCSSHH---HHHHHH-HHH--------TTSEEEEEEEEEEEETT-EEEEEEEEE
T ss_pred E---ECCEE-------ECCCCCHH---HHHHHH-HHH--------CCCCEEEEEEEEEEECC-EEEEEEEEE
T ss_conf 9---89999-------47999999---999999-982--------89966999999999899-899999999
No 8
>>2amh_A Septum formation protein MAF homologue, putative; domain alpha-beta motif, structural genomics, PSI, protein structure initiative; 2.00A {Trypanosoma brucei} (A:)
Probab=93.03 E-value=0.66 Score=25.49 Aligned_cols=117 Identities=11% Similarity=-0.021 Sum_probs=65.1
Q ss_pred CCEEEEECCCCCHHHHHHHHHH--HCCCEEEEHHHCCCCCCCCCCCCHH----HHHHHHHHHHCCCC---------CCEE
Q ss_conf 7779998499227999999730--0791997244478856666765545----67787653311345---------6307
Q gi|254780629|r 6 ENNIVIASHNVDKIHEMDSLIM--PLGIMTTSALELNLIIPEETGNSFE----ENAMIKSLTAAKNA---------GMPA 70 (224)
Q Consensus 6 ~~kii~aT~N~~K~~E~~~iL~--~~~i~~~~~~~~~~~~peE~g~tf~----eNA~~KA~~~~~~~---------~~pv 70 (224)
+.+|++||+-+.-.+=++++-- .+++.+++ .+++|......+.. ..|..||+.+++.. ...|
T Consensus 9 ~~~iILaS~SprR~~lL~~~Gi~~~~~F~~~~---~~idE~~~~~~~p~e~v~~lA~~Ka~~v~~~~~~~~~~~~~~~iv 85 (207)
T 2amh_A 9 IRTMIIGTSSAFRANVLREHFGDRFRNFVLLP---PDIDEKAYRAADPFELTESIARAKMKAVLEKARQHSPPISGPAIA 85 (207)
T ss_dssp CCEEEECCCCHHHHHHHHHHHTTTCSEEEECC---CCCCGGGCCCSSHHHHHHHHHHHHHHHHHHHHHTC------CEEE
T ss_pred CCCEEEECCCHHHHHHHHHCCCCCCCCEEEEC---CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
T ss_conf 68789905999999999965877787659869---998988877789799999999998988887776542246887489
Q ss_pred EEECHHHHHHH-HHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCC-CCCEEEEEEE
Q ss_conf 85201243434-201445143443045788688899999988777521356777650689986201323-4210456433
Q gi|254780629|r 71 LSDDSGLVIDV-LDGKPGIHSARWAESNTGERDFDMAMQKIENALRSKFAHDPAFRSAHFISVLSLAWP-DGHVENFSGK 148 (224)
Q Consensus 71 laDDSGL~vda-L~G~PGvySaR~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~R~A~f~~~~~~~~~-~~~~~~f~G~ 148 (224)
|+-|+-+.++. .=|.|. +.+ .+.+.+ ..+ ..+...+.|.+|++.. .+..+.+.-.
T Consensus 86 i~aDtvv~~~g~i~~KP~-----------~~~---eA~~~L-~~l--------sG~~h~v~T~v~l~~~~~~~~~~~~~~ 142 (207)
T 2amh_A 86 LTFDQVVVKGDEVREKPL-----------STE---QCRSFI-ASY--------SGGGVRTVATYALCVVGTENVLVAHNE 142 (207)
T ss_dssp EEEEEEEEETTEEECSCS-----------SHH---HHHHHH-HHH--------TTSEEEEEEEEEEEETTCSCEEEEEEE
T ss_pred EEECCHHCCCCCCCCCCC-----------CHH---HHHHHH-HHH--------CCCCEEEEEEEEEEECCCCEEEEEEEE
T ss_conf 982320021343036988-----------527---899999-997--------499508999999996898279999976
No 9
>>2vvp_A Ribose-5-phosphate isomerase B; RPIB, RV2465C, RARE sugar, carbohydrate metabolism, pentose phosphate pathway; HET: R52 5RP; 1.65A {Mycobacterium tuberculosis} (A:1-132)
Probab=88.83 E-value=1.5 Score=23.46 Aligned_cols=84 Identities=7% Similarity=0.141 Sum_probs=60.0
Q ss_pred CCCCEEEEECCCCC-HHHH-HHHHHHHCCCEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCC-CCEEEEECHHHH-H
Q ss_conf 56777999849922-7999-999730079199724447885666676554567787653311345-630785201243-4
Q gi|254780629|r 4 LIENNIVIASHNVD-KIHE-MDSLIMPLGIMTTSALELNLIIPEETGNSFEENAMIKSLTAAKNA-GMPALSDDSGLV-I 79 (224)
Q Consensus 4 ~~~~kii~aT~N~~-K~~E-~~~iL~~~~i~~~~~~~~~~~~peE~g~tf~eNA~~KA~~~~~~~-~~pvlaDDSGL~-v 79 (224)
|.++||.+++-..| .+++ +..+|+..+++++.+ ... .++...+|-+-|..=|....+.. ..-++.+-||+= -
T Consensus 1 m~~mkI~igsDh~G~~lK~~l~~~L~~~g~eV~D~---G~~-~~~~~~dyp~~a~~va~~v~~~~~~~GIliCGtGiG~s 76 (132)
T 2vvp_A 1 MSGMRVYLGADHAGYELKQRIIEHLKQTGHEPIDC---GAL-RYDADDDYPAFCIAAATRTVADPGSLGIVLGGSGNGEQ 76 (132)
T ss_dssp --CCEEEEEECHHHHHHHHHHHHHHHHTTCEEEEC---SCC-SCCTTCCHHHHHHHHHHHHHHSTTCEEEEEESSSHHHH
T ss_pred CCCCEEEEEECCCHHHHHHHHHHHHHHCCCEEEEC---CCC-CCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHH
T ss_conf 99989999817746999999999999879988975---998-77888876789999998862255663888526418999
Q ss_pred HHHHCCCCHHHH
Q ss_conf 342014451434
Q gi|254780629|r 80 DVLDGKPGIHSA 91 (224)
Q Consensus 80 daL~G~PGvySa 91 (224)
=+.|-.|||+.|
T Consensus 77 iaANK~~Giraa 88 (132)
T 2vvp_A 77 IAANKVPGARCA 88 (132)
T ss_dssp HHHHTSTTCCEE
T ss_pred HHHHHHCCEEEE
T ss_conf 998752574755
No 10
>>1zwy_A Hypothetical UPF0244 protein VC0702; hypothetical protein, structural genomics, PSI, protein structure initiative; 1.90A {Vibrio cholerae} (A:)
Probab=82.66 E-value=2.4 Score=22.24 Aligned_cols=63 Identities=17% Similarity=0.191 Sum_probs=39.1
Q ss_pred CCCCCCCEEEEECCCCCHHHHHHHHHHHC----CCEEEEHHHCCCCCCCCCCCCHH---HHHHHHHHHHCCC
Q ss_conf 96656777999849922799999973007----91997244478856666765545---6778765331134
Q gi|254780629|r 1 MRKLIENNIVIASHNVDKIHEMDSLIMPL----GIMTTSALELNLIIPEETGNSFE---ENAMIKSLTAAKN 65 (224)
Q Consensus 1 m~~~~~~kii~aT~N~~K~~E~~~iL~~~----~i~~~~~~~~~~~~peE~g~tf~---eNA~~KA~~~~~~ 65 (224)
|+++...+|.++|.|+-|++=++..|..+ .+.+++.. .+- -+.+|--+++ .=|+..|+.+.+.
T Consensus 7 i~~~~~~~V~VgS~Np~Kv~Av~~af~~~f~~~~~~v~~v~-v~S-gV~~QP~g~eEt~~GA~nRa~~a~~~ 76 (185)
T 1zwy_A 7 IKRRVXRKIIIASQNPAKVNAVRSAFSTVFPDQEWEFIGVS-VPS-EVADQPXSDEETKQGALNRVRNAKQR 76 (185)
T ss_dssp ----CCCEEEESCCCHHHHHHHHHHHHHHCTTCCCEEEECC-CCC-SSCSSCCSHHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEEC-CCC-CCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 77577579999259989999999999996798705999742-798-97999989899999999999999962
No 11
>>3brc_A Conserved protein of unknown function; methanobacterium thermoautotrophicum, structural genomics, MCSG, PSI-2; 1.60A {Methanothermobacterthermautotrophicus str} (A:37-156)
Probab=79.83 E-value=1.4 Score=23.66 Aligned_cols=57 Identities=16% Similarity=0.308 Sum_probs=37.9
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
Q ss_conf 7799984992279999997300791997244478856666765545677876533113456
Q gi|254780629|r 7 NNIVIASHNVDKIHEMDSLIMPLGIMTTSALELNLIIPEETGNSFEENAMIKSLTAAKNAG 67 (224)
Q Consensus 7 ~kii~aT~N~~K~~E~~~iL~~~~i~~~~~~~~~~~~peE~g~tf~eNA~~KA~~~~~~~~ 67 (224)
++|+.+|+|..|++-+..++..++..-+...++ |....+.-.--|+.|+.-+.+.++
T Consensus 1 kkivVat~N~kKf~vi~~il~~~~~~~~~ml~i----~Tn~aDltR~PAi~KgliAvD~sd 57 (120)
T 3brc_A 1 RRTVVPNWNAEKVDAINDVLRSFNLREAEHLQF----NTNWADLTRXPAVTKALXALDISG 57 (120)
T ss_dssp SCEEECCCCHHHHHHHHHHHHHTTCCCCEECCS----CCGGGGGSSSHHHHHHHHHHHHHC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEC----CCCCCCCCCCCHHHHHHEEEECCC
T ss_conf 549985597167799999999736864125765----687200113806653311452368
No 12
>>2ppw_A Conserved domain protein; the putative RPIB, PSI-2, protein structure initiative, MCSG, structural genomics; HET: MSE; 2.01A {Streptococcus pneumoniae TIGR4} (A:)
Probab=58.53 E-value=14 Score=17.82 Aligned_cols=84 Identities=14% Similarity=0.163 Sum_probs=58.5
Q ss_pred CCCEEEEECCCCC--HHHHHHHHHH----HCCCEEEEHHHCCCCCC-CCCCCCHHHHHHHHHHHHCCCC-CCEEEEECHH
Q ss_conf 6777999849922--7999999730----07919972444788566-6676554567787653311345-6307852012
Q gi|254780629|r 5 IENNIVIASHNVD--KIHEMDSLIM----PLGIMTTSALELNLIIP-EETGNSFEENAMIKSLTAAKNA-GMPALSDDSG 76 (224)
Q Consensus 5 ~~~kii~aT~N~~--K~~E~~~iL~----~~~i~~~~~~~~~~~~p-eE~g~tf~eNA~~KA~~~~~~~-~~pvlaDDSG 76 (224)
|++||.+++-+.+ +=.++...|+ +.|.+++. +...-+ +.+..+|-+.|..=|....... ..-++..-||
T Consensus 2 m~~KIaig~Dhag~~lK~~i~~~L~~~~~~~G~eV~D---~G~~~~~~~~~~~Yp~~~~~va~~v~~g~~d~gI~iCGTG 78 (216)
T 2ppw_A 2 NAXKIALINENSQASKNHIIYDSLKEATDKKGYQLFN---YGXRGEEGESQLTYVQNGLXAAILLNTKAVDFVVTGCGTG 78 (216)
T ss_dssp -CCEEEECCCTTTGGGHHHHHHHHHHHHHHHTCEEEE---CSCCSCTTCCCCCHHHHHHHHHHHHHTTSCSEEEEEESSS
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEE---CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCC
T ss_conf 9638999546512668999999999999848988996---7889866567887719999999999769986699977888
Q ss_pred HH-HHHHHCCCCHHHH
Q ss_conf 43-4342014451434
Q gi|254780629|r 77 LV-IDVLDGKPGIHSA 91 (224)
Q Consensus 77 L~-vdaL~G~PGvySa 91 (224)
+= -=|.|-+|||+.+
T Consensus 79 ~G~~iaaNK~pGVraa 94 (216)
T 2ppw_A 79 VGAXLALNSFPGVVCG 94 (216)
T ss_dssp HHHHHHHTTSTTCCEE
T ss_pred HHHHHHHHCCCCEEEE
T ss_conf 8999998535982660
No 13
>>1u14_A Hypothetical UPF0244 protein YJJX; structural genomics, protein structure initiative, PSI, midwest center for structural genomics, MCSG; 1.68A {Salmonella typhimurium} (A:)
Probab=55.93 E-value=15 Score=17.56 Aligned_cols=57 Identities=16% Similarity=0.067 Sum_probs=33.5
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHC----CCEEEEHHHC-CCCCCCCCCCCHH---HHHHHHHHHHCCC
Q ss_conf 777999849922799999973007----9199724447-8856666765545---6778765331134
Q gi|254780629|r 6 ENNIVIASHNVDKIHEMDSLIMPL----GIMTTSALEL-NLIIPEETGNSFE---ENAMIKSLTAAKN 65 (224)
Q Consensus 6 ~~kii~aT~N~~K~~E~~~iL~~~----~i~~~~~~~~-~~~~peE~g~tf~---eNA~~KA~~~~~~ 65 (224)
+++|+++|.|+-|++=+++.|..+ .+.+.+..-. .+. .|--+++ .=|...|+.+.+.
T Consensus 2 ~mkV~VgS~Np~Kv~AV~~af~~~f~~~~~~v~~v~v~SgV~---~QP~g~eEt~~GA~nRa~~a~~~ 66 (172)
T 1u14_A 2 XHQVISATTNPAKIQAILQAFEEIFGEGSCHITPVAVESGVP---EQPFGSEETRAGARNRVDNARRL 66 (172)
T ss_dssp CEEEEESCCCHHHHHHHHHHHHHHHCTTCEEEEECCCCCSSC---SSCBSHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC---CCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 569999369989999999999996599837999964699989---99988699999999999999850
No 14
>>1o1x_A Ribose-5-phosphate isomerase RPIB; TM1080, structural genomics, JCSG, PSI, protein structure initiative; 1.90A {Thermotoga maritima} (A:1-141)
Probab=52.15 E-value=18 Score=17.20 Aligned_cols=83 Identities=18% Similarity=0.191 Sum_probs=59.9
Q ss_pred CCCCEEEEECCCCC-HH-HHHHHHHHHCCCEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCC-CCEEEEECHHH-HH
Q ss_conf 56777999849922-79-99999730079199724447885666676554567787653311345-63078520124-34
Q gi|254780629|r 4 LIENNIVIASHNVD-KI-HEMDSLIMPLGIMTTSALELNLIIPEETGNSFEENAMIKSLTAAKNA-GMPALSDDSGL-VI 79 (224)
Q Consensus 4 ~~~~kii~aT~N~~-K~-~E~~~iL~~~~i~~~~~~~~~~~~peE~g~tf~eNA~~KA~~~~~~~-~~pvlaDDSGL-~v 79 (224)
-.++||.+++-..| -+ .++..+|...+.+++..- .. .++..+|-+.|..=|+...+-. ..-++.+-||+ .-
T Consensus 10 ~~~MkI~igsDhaG~~lK~~l~~~L~~~g~eV~D~G---~~--~~~~~dypd~a~~va~~V~~g~~~~GIliCgtG~G~~ 84 (141)
T 1o1x_A 10 HHHVKIAIASDHAAFELKEKVKNYLLGKGIEVEDHG---TY--SEESVDYPDYAKKVVQSILSNEADFGILLXGTGLGXS 84 (141)
T ss_dssp -CCCEEEEEECSTTHHHHHHHHHHHHHTTCEEEECC---CC--SSSCCCHHHHHHHHHHHHHTTSCSEEEEEESSSHHHH
T ss_pred CCCEEEEEEECCHHHHHHHHHHHHHHHCCCEEEECC---CC--CCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHH
T ss_conf 776499997387279999999999997799899779---99--7787780289999999960477667999758976699
Q ss_pred HHHHCCCCHHHH
Q ss_conf 342014451434
Q gi|254780629|r 80 DVLDGKPGIHSA 91 (224)
Q Consensus 80 daL~G~PGvySa 91 (224)
=+.|-.|||+.+
T Consensus 85 iaANK~~GIrAa 96 (141)
T 1o1x_A 85 IAANRYRGIRAA 96 (141)
T ss_dssp HHHTTSTTCCEE
T ss_pred HHHHCCCCEEEE
T ss_conf 997448986999
No 15
>>3he8_A Ribose-5-phosphate isomerase; CTRPI B, isomerization, X-RAY crystallography; 1.90A {Clostridium thermocellum} PDB: 3hee_A* (A:1-128)
Probab=49.13 E-value=20 Score=16.92 Aligned_cols=80 Identities=14% Similarity=0.115 Sum_probs=59.1
Q ss_pred CEEEEECCCCCH--HHHHHHHHHHCCCEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCC-CCEEEEECHHH-HHHHH
Q ss_conf 779998499227--999999730079199724447885666676554567787653311345-63078520124-34342
Q gi|254780629|r 7 NNIVIASHNVDK--IHEMDSLIMPLGIMTTSALELNLIIPEETGNSFEENAMIKSLTAAKNA-GMPALSDDSGL-VIDVL 82 (224)
Q Consensus 7 ~kii~aT~N~~K--~~E~~~iL~~~~i~~~~~~~~~~~~peE~g~tf~eNA~~KA~~~~~~~-~~pvlaDDSGL-~vdaL 82 (224)
+||.+++--.|. -++++.+|+..+.+++..- . ..++..+|-+.|..=|....+.. ..-++.+-||. .-=+.
T Consensus 1 MkI~igsDhaG~~lK~~i~~~L~~~g~eV~D~G---~--~~~~~~dypd~a~~va~~v~~~~~~~GIliCGtG~G~~iaa 75 (128)
T 3he8_A 1 MKIGIGSDHGGYNLKREIADFLKKRGYEVIDFG---T--HGNESVDYPDFGLKVAEAVKSGECDRGIVICGTGLGISIAA 75 (128)
T ss_dssp CEEEEEECGGGHHHHHHHHHHHHHTTCEEEECC---C--CSSSCCCHHHHHHHHHHHHHTTSSSEEEEEESSSHHHHHHH
T ss_pred CEEEEEECCCHHHHHHHHHHHHHHCCCEEEECC---C--CCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHH
T ss_conf 989998477469999999999998799889669---9--98887683789999999998415335898358773045554
Q ss_pred HCCCCHHHH
Q ss_conf 014451434
Q gi|254780629|r 83 DGKPGIHSA 91 (224)
Q Consensus 83 ~G~PGvySa 91 (224)
|-.|||+-+
T Consensus 76 NK~~Giraa 84 (128)
T 3he8_A 76 NKVPGIRAA 84 (128)
T ss_dssp HTSTTCCEE
T ss_pred HCCCCCEEE
T ss_conf 248995543
No 16
>>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} (A:13-64,A:239-259)
Probab=43.87 E-value=10 Score=18.57 Aligned_cols=19 Identities=16% Similarity=0.286 Sum_probs=13.8
Q ss_pred CCCCHHHHHHHHHHHHHHH
Q ss_conf 3525899999999999987
Q gi|254780629|r 202 DLLSHRARAFKCFVDNCLR 220 (224)
Q Consensus 202 ~~iSHR~~Al~kl~~~l~~ 220 (224)
..||||++.+..+++....
T Consensus 26 mEISHRSk~F~~I~~eae~ 44 (73)
T 2c0r_A 26 MEMSHRGAVYEAVHNEAQA 44 (73)
T ss_dssp GGSCTTSHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHH
T ss_conf 3447789899999999999
No 17
>>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} (A:12-63,A:238-258)
Probab=33.37 E-value=18 Score=17.13 Aligned_cols=18 Identities=22% Similarity=0.405 Sum_probs=13.2
Q ss_pred CCCHHHHHHHHHHHHHHH
Q ss_conf 525899999999999987
Q gi|254780629|r 203 LLSHRARAFKCFVDNCLR 220 (224)
Q Consensus 203 ~iSHR~~Al~kl~~~l~~ 220 (224)
.+|||++.+.++++.-.+
T Consensus 27 EiSHRSk~F~~Ii~eae~ 44 (73)
T 1w23_A 27 ELSHRSQSYEEVHEQAQN 44 (73)
T ss_dssp GSCTTSHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHH
T ss_conf 467678899999999999
No 18
>>1bjn_A PSAT, phosphoserine aminotransferase; L-serine biosynthesis; HET: LLP; 2.30A {Escherichia coli} (A:10-61,A:238-258)
Probab=33.19 E-value=18 Score=17.10 Aligned_cols=19 Identities=21% Similarity=0.331 Sum_probs=13.5
Q ss_pred CCCCHHHHHHHHHHHHHHH
Q ss_conf 3525899999999999987
Q gi|254780629|r 202 DLLSHRARAFKCFVDNCLR 220 (224)
Q Consensus 202 ~~iSHR~~Al~kl~~~l~~ 220 (224)
..+|||++.+.++++...+
T Consensus 26 lEiSHRSk~F~~Ii~eae~ 44 (73)
T 1bjn_A 26 MEVSHRGKEFIQVAEEAEK 44 (73)
T ss_dssp GGSCTTSHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHH
T ss_conf 3457678899999999999
No 19
>>3c5y_A Ribose/galactose isomerase; YP_001165900.1, putative ribose 5-phosphate isomerase, structural genomics; HET: MSE; 1.81A {Novosphingobium aromaticivorans DSM12444} (A:)
Probab=32.95 E-value=36 Score=15.41 Aligned_cols=84 Identities=12% Similarity=0.235 Sum_probs=55.6
Q ss_pred CCCEEEEECCCCCH--H----HHHHHHHHHCCCEEEEHHHCCCCCC-CCCCCCHHHHHHHHHHHHCCCCC-CEEEEECHH
Q ss_conf 67779998499227--9----9999973007919972444788566-66765545677876533113456-307852012
Q gi|254780629|r 5 IENNIVIASHNVDK--I----HEMDSLIMPLGIMTTSALELNLIIP-EETGNSFEENAMIKSLTAAKNAG-MPALSDDSG 76 (224)
Q Consensus 5 ~~~kii~aT~N~~K--~----~E~~~iL~~~~i~~~~~~~~~~~~p-eE~g~tf~eNA~~KA~~~~~~~~-~pvlaDDSG 76 (224)
..+||.+++-+.+- = ++++..|.+.|.+++.. ....+ +.+..+|-++|..=|........ .-++.+-||
T Consensus 18 ~~~KIaig~Dh~g~~lK~~i~~~L~~~l~~~G~eV~D~---G~~~~~~~~~~~Yp~~~~~va~~v~~g~~d~gI~iCGTG 94 (231)
T 3c5y_A 18 QGXKIALIIENSQAAKNAVVHEALTTVAEPLGHKVFNY---GXYTAEDKASLTYVXNGLLAGILLNSGAADFVVTGXGTG 94 (231)
T ss_dssp -CCEEEECCCGGGGGGHHHHHHHHHHHHGGGTCEEEEC---CCCSTTCSSCCCHHHHHHHHHHHHHHTSCSEEEEEESSS
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEC---CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCC
T ss_conf 78679996455103444899999999998489889965---888876556887658999999999669876689966888
Q ss_pred HHHH-HHHCCCCHHHH
Q ss_conf 4343-42014451434
Q gi|254780629|r 77 LVID-VLDGKPGIHSA 91 (224)
Q Consensus 77 L~vd-aL~G~PGvySa 91 (224)
.=+- |.|-+|||+.+
T Consensus 95 ~G~~iaaNK~pGVraa 110 (231)
T 3c5y_A 95 XGSXLAANAXPGVFCG 110 (231)
T ss_dssp HHHHHHHHTSTTCCEE
T ss_pred HHHHHHHHCCCCEEEE
T ss_conf 8899997158998981
No 20
>>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} (A:47-68,A:201-285)
Probab=31.33 E-value=38 Score=15.25 Aligned_cols=29 Identities=17% Similarity=0.236 Sum_probs=24.3
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCEEEEH
Q ss_conf 79998499227999999730079199724
Q gi|254780629|r 8 NIVIASHNVDKIHEMDSLIMPLGIMTTSA 36 (224)
Q Consensus 8 kii~aT~N~~K~~E~~~iL~~~~i~~~~~ 36 (224)
+|+=-.++++-++|++++|+.+|+.+...
T Consensus 32 NIIG~~~~~~D~~EIkrlL~~~Gi~vn~~ 60 (107)
T 1mio_A 32 NVLGEYNIGGDAWEMDRVLEKIGYHVNAT 60 (107)
T ss_dssp EEEEECCBTSHHHHHHHHHHHHTCEEEEE
T ss_pred EEEECCCCCCCHHHHHHHHHHCCCCEEEE
T ss_conf 99807877214999999999859945897
No 21
>>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} (A:)
Probab=27.72 E-value=44 Score=14.88 Aligned_cols=33 Identities=15% Similarity=0.196 Sum_probs=29.2
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEH
Q ss_conf 567779998499227999999730079199724
Q gi|254780629|r 4 LIENNIVIASHNVDKIHEMDSLIMPLGIMTTSA 36 (224)
Q Consensus 4 ~~~~kii~aT~N~~K~~E~~~iL~~~~i~~~~~ 36 (224)
|++++|+++..|+.=.+-++++|...|+.+...
T Consensus 1 l~~~~iLiVdd~~~~~~~l~~~l~~~g~~v~~a 33 (124)
T 1srr_A 1 MMNEKILIVDDQSGIRILLNEVFNKEGYQTFQA 33 (124)
T ss_dssp --CCEEEEECSCHHHHHHHHHHHHTTTCEEEEE
T ss_pred CCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEE
T ss_conf 998859999799999999999999869989995
No 22
>>1mio_B Nitrogenase molybdenum iron protein (beta chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} (B:1-35,B:144-268)
Probab=26.66 E-value=46 Score=14.76 Aligned_cols=24 Identities=13% Similarity=0.073 Sum_probs=14.5
Q ss_pred CCCCCHHHHHHHHHHHCCCEEEEH
Q ss_conf 499227999999730079199724
Q gi|254780629|r 13 SHNVDKIHEMDSLIMPLGIMTTSA 36 (224)
Q Consensus 13 T~N~~K~~E~~~iL~~~~i~~~~~ 36 (224)
.++++-++|++++|..+|+.+..+
T Consensus 70 ~~~~~Dv~eLk~lL~~~Gi~vnvl 93 (160)
T 1mio_B 70 FVGPADMREIKRLFEAMDIPYIMF 93 (160)
T ss_dssp SCCHHHHHHHHHHHHHHTCCEEES
T ss_pred CCCCCCHHHHHHHHHHHCCCEEEC
T ss_conf 887147999999999819966742
No 23
>>1c01_A Antimicrobial peptide 1; greek KEY, beta-barrel; NMR {Macadamia integrifolia} (A:)
Probab=26.62 E-value=29 Score=15.96 Aligned_cols=35 Identities=26% Similarity=0.391 Sum_probs=20.3
Q ss_pred CCCCCEEEEEEEE---------EEEE----EECCCCCCCCCCCEEEEE
Q ss_conf 2342104564333---------2499----826411788572313665
Q gi|254780629|r 137 WPDGHVENFSGKV---------SGII----VWPPRGQLGFGYDPIFQP 171 (224)
Q Consensus 137 ~~~~~~~~f~G~~---------~G~I----~~~prG~~GFGyDpIF~p 171 (224)
..+|..+.|+|.. .|.- ...-+.-++|||-+|||-
T Consensus 28 ~hgGyeF~y~GqTA~~Yn~~~C~G~~~trF~~~~qaC~~FGWkS~fIq 75 (76)
T 1c01_A 28 QKGGYDFSYTGQTAALYNQAGCSGVAHTRFGSSARACNPFGWKSIFIQ 75 (76)
T ss_dssp CCSCEEEECSSCCEEEESSGGGCSCEEEEESSCCCBCSCCCCSEEEEC
T ss_pred ECCCEEEEEECCCCEEECCCCCCCCCEEEECCCCCCCCCCCCEEEEEE
T ss_conf 327617898032330032688688762131235411257773478861
No 24
>>2vvr_A Ribose-5-phosphate isomerase B; RPIB, carbohydrate metabolism, pentose phosphate pathway; 2.1A {Escherichia coli} PDB: 1nn4_A (A:1-130)
Probab=25.80 E-value=48 Score=14.67 Aligned_cols=81 Identities=16% Similarity=0.176 Sum_probs=57.7
Q ss_pred CCEEEEECCCCCH--HHHHHHHHHHCCCEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCC-CCEEEEECHHHHHH-H
Q ss_conf 7779998499227--999999730079199724447885666676554567787653311345-63078520124343-4
Q gi|254780629|r 6 ENNIVIASHNVDK--IHEMDSLIMPLGIMTTSALELNLIIPEETGNSFEENAMIKSLTAAKNA-GMPALSDDSGLVID-V 81 (224)
Q Consensus 6 ~~kii~aT~N~~K--~~E~~~iL~~~~i~~~~~~~~~~~~peE~g~tf~eNA~~KA~~~~~~~-~~pvlaDDSGL~vd-a 81 (224)
|+||.+++--.+. -.++..+|+..+.+++.. ... .++..+|-+.|..=|+...+-. ..-++.+-||.=+. +
T Consensus 1 mmkI~igsDhag~~lK~~i~~~L~~~g~eV~D~---G~~--~~~~~dypd~a~~va~~v~~~~~~~GIliCGtG~G~~ia 75 (130)
T 2vvr_A 1 MKKIAFGCDHVGFILKHEIVAHLVERGVEVIDK---GTW--SSERTDYPHYASQVALAVAGGEVDGGILICGTGVGISIA 75 (130)
T ss_dssp CCEEEEEECTTGGGGHHHHHHHHHHTTCEEEEC---CCC--SSSCCCHHHHHHHHHHHHHTTSSSEEEEEESSSHHHHHH
T ss_pred CCEEEEEECCCHHHHHHHHHHHHHHCCCEEEEC---CCC--CCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHH
T ss_conf 977999748707999999999999879989965---998--676668517889999998716653268715875489999
Q ss_pred HHCCCCHHHH
Q ss_conf 2014451434
Q gi|254780629|r 82 LDGKPGIHSA 91 (224)
Q Consensus 82 L~G~PGvySa 91 (224)
.|-.|||+-|
T Consensus 76 ANKv~GIrAa 85 (130)
T 2vvr_A 76 ANKFAGIRAV 85 (130)
T ss_dssp HHTSTTCCEE
T ss_pred HHHCCCCEEE
T ss_conf 8841693355
No 25
>>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics, protein structure initiative; 2.89A {Clostridium difficile 630} (A:)
Probab=25.39 E-value=49 Score=14.63 Aligned_cols=79 Identities=10% Similarity=0.110 Sum_probs=50.8
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEHHHC----------CCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEE-
Q ss_conf 567779998499227999999730079199724447----------885666676554567787653311345630785-
Q gi|254780629|r 4 LIENNIVIASHNVDKIHEMDSLIMPLGIMTTSALEL----------NLIIPEETGNSFEENAMIKSLTAAKNAGMPALS- 72 (224)
Q Consensus 4 ~~~~kii~aT~N~~K~~E~~~iL~~~~i~~~~~~~~----------~~~~peE~g~tf~eNA~~KA~~~~~~~~~pvla- 72 (224)
.|+.+|+++..|+.=..-++.+|...|+.+....+. ..+.+.-+-.....+...-++..-+....|+|.
T Consensus 2 sm~~rVLiVdDd~~~~~~l~~~L~~~g~~v~~a~~~~~al~~l~~~~~dliilD~~lp~~dG~el~~~ir~~~~~PiI~l 81 (136)
T 2qzj_A 2 SLQTKILIIDGDKDNCQKLKGFLEEKGISIDLAYNCEEAIGKIFSNKYDLIFLEIILSDGDGWTLCKKIRNVTTCPIVYX 81 (136)
T ss_dssp --CCEEEEECSCHHHHHHHHHHHHTTTCEEEEESSHHHHHHHHHHCCCSEEEEESEETTEEHHHHHHHHHTTCCCCEEEE
T ss_pred CCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEE
T ss_conf 97876999989999999999999987999999824889999860669868986213367503557767531687759999
Q ss_pred ---ECHHHHHHHH
Q ss_conf ---2012434342
Q gi|254780629|r 73 ---DDSGLVIDVL 82 (224)
Q Consensus 73 ---DDSGL~vdaL 82 (224)
.+....+.++
T Consensus 82 t~~~~~~~~~~~l 94 (136)
T 2qzj_A 82 TYINEDQSILNAL 94 (136)
T ss_dssp ESCCCHHHHHHHH
T ss_pred ECCCCHHHHHHHH
T ss_conf 1379999999999
No 26
>>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} (B:210-292)
Probab=23.12 E-value=40 Score=15.10 Aligned_cols=53 Identities=6% Similarity=0.048 Sum_probs=33.7
Q ss_pred CCCEEEEEC---CCCCHHHHHHHHHHHCCCEEEEHHHCC--CCC-------CCCCCCCHHHHHHH
Q ss_conf 677799984---992279999997300791997244478--856-------66676554567787
Q gi|254780629|r 5 IENNIVIAS---HNVDKIHEMDSLIMPLGIMTTSALELN--LII-------PEETGNSFEENAMI 57 (224)
Q Consensus 5 ~~~kii~aT---~N~~K~~E~~~iL~~~~i~~~~~~~~~--~~~-------peE~g~tf~eNA~~ 57 (224)
.+.+|-+.. -|++-++|+++++..++++.+-+.|+. ++- ...-|++.++.+..
T Consensus 7 ~~~kiNilpG~~~~pgDi~elK~i~~~fGl~~~iLpD~S~slDgp~~~~~~~~~GGT~leei~~~ 71 (83)
T 1qgu_B 7 KLPKLNLVTGFETYLGNFRVLKRMMEQMAVPCSLLSDPSEVLDTPADGHYRMYSGGTTQQEMKEA 71 (83)
T ss_dssp SEEEEEEECCSCCCHHHHHHHHHHHHHHTCCEEESSCTTTTTSCCCSSCCCSCCCCBCHHHHHHG
T ss_pred CCCEEEEEECCCCCCCCHHHHHHHHHHHCCCEEECCCCHHCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 77737896146788345999999999819955765770321466656664204899889999987
No 27
>>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genomics; 1.85A {Pyrococcus horikoshii OT3} (A:1-69,A:202-263)
Probab=22.69 E-value=55 Score=14.32 Aligned_cols=29 Identities=14% Similarity=0.157 Sum_probs=21.2
Q ss_pred CCCEEEEECCCCCHH-HHHHHHHHHCCCEE
Q ss_conf 677799984992279-99999730079199
Q gi|254780629|r 5 IENNIVIASHNVDKI-HEMDSLIMPLGIMT 33 (224)
Q Consensus 5 ~~~kii~aT~N~~K~-~E~~~iL~~~~i~~ 33 (224)
+..+++++|||..+. +++.+.|..+|+..
T Consensus 32 ~G~~~~ivTN~~~~~~~~~~~~L~~lg~~~ 61 (131)
T 1zjj_A 32 RGIPFAFLTNNSTKTPEMYREKLLKMGIDV 61 (131)
T ss_dssp HTCCEEEEESCCSSCHHHHHHHHHTTTCCC
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHCCCCC
T ss_conf 799689994899999999999999769988
Done!