HHSEARCH alignment of GI: 254780629 and SCOP domain: d2amha1

Alignment

Probab=91.01  E-value=0.47  Score=24.09  Aligned_cols=116  Identities=11%  Similarity=-0.024  Sum_probs=61.7

Q ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCC--EEEEHHHCCCCCCCCCCCC----HHHHHHHHHHHHCCCCC---------CE
Q ss_conf             677799984992279999997300791--9972444788566667655----45677876533113456---------30
Q gi|254780629|r    5 IENNIVIASHNVDKIHEMDSLIMPLGI--MTTSALELNLIIPEETGNS----FEENAMIKSLTAAKNAG---------MP   69 (224)
Q Consensus         5 ~~~kii~aT~N~~K~~E~~~iL~~~~i--~~~~~~~~~~~~peE~g~t----f~eNA~~KA~~~~~~~~---------~p   69 (224)
                      .|++|++||+-+--.+=++.+....++  .+++ .+++-..+  .+.+    ....|..||+.++....         ..
T Consensus         2 ~~k~lILAS~S~rR~~lL~~~g~~~~~~f~v~~-~~idE~~~--~~~~p~~~~~~lA~~Ka~~v~~~~~~~~~~~~~~~i   78 (201)
T d2amha1           2 EIRTMIIGTSSAFRANVLREHFGDRFRNFVLLP-PDIDEKAY--RAADPFELTESIARAKMKAVLEKARQHSPPISGPAI   78 (201)
T ss_dssp             CCCEEEECCCCHHHHHHHHHHHTTTCSEEEECC-CCCCGGGC--CCSSHHHHHHHHHHHHHHHHHHHHHTC------CEE
T ss_pred             CCCCEEEECCCHHHHHHHHHCCCCCCCCEEEEC-CCCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE
T ss_conf             877199905999999999866976787779969-99898987--657978999999998777654233331013467629


Q ss_pred             EEEECHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCC-CEEEE
Q ss_conf             78520124343420144514344304578868889999998877752135677765068998620132342-10456
Q gi|254780629|r   70 ALSDDSGLVIDVLDGKPGIHSARWAESNTGERDFDMAMQKIENALRSKFAHDPAFRSAHFISVLSLAWPDG-HVENF  145 (224)
Q Consensus        70 vlaDDSGL~vdaL~G~PGvySaR~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~R~A~f~~~~~~~~~~~-~~~~f  145 (224)
                      +|+.|+-+.   ++|.       -.++..+.++   +...+ ..+.        .++-++.|.++++..++ .+..+
T Consensus        79 vi~aDtvv~---~~g~-------i~~KP~~~~~---A~~~L-~~ls--------g~~h~v~T~v~v~~~~~~~~~~~  133 (201)
T d2amha1          79 ALTFDQVVV---KGDE-------VREKPLSTEQ---CRSFI-ASYS--------GGGVRTVATYALCVVGTENVLVA  133 (201)
T ss_dssp             EEEEEEEEE---ETTE-------EECSCSSHHH---HHHHH-HHHT--------TSEEEEEEEEEEEETTCSCEEEE
T ss_pred             EEEECCCCC---CCCC-------CCCCCCCCHH---HHHHH-HHHC--------CCCCEEEEEEEEEECCCCEEEEE
T ss_conf             996133101---1332-------1267200004---67889-9864--------78638999999996898589999

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Anticodon-binding domain-like
superfamily: ITPase-like
family: Maf-like
domain: Maf homologue Tb11.01.5890
species: Trypanosoma brucei [TaxId: 5691]