HHsearch results for GI: 254780630 and protein with PDBid: 1e3p_A

>1e3p_A Guanosine pentaphosphate synthetase; polyribonucleotide transferase, ATP-GTP diphosphotransferase RNA processing, RNA degradation; 2.5A {Streptomyces antibioticus} SCOP: a.4.9.1 b.40.4.5 d.14.1.4 d.14.1.4 d.52.3.1 d.101.1.1 d.101.1.1 PDB: 1e3h_A
Probab=99.95  E-value=6e-27  Score=169.15  Aligned_cols=212  Identities=18%  Similarity=0.128  Sum_probs=176.7

Q ss_pred             EEEEEEEC-CCCCCCCEEEEEE-CCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCC-CCCCCCCCCCCCHH
Q ss_conf             87999976-6326882899996-894899999933324531015543421100100555653222-33344447773102
Q gi|254780630|r   12 REISLTRR-VSKYAEGSCLVKF-GDTHLLTTATLEEKVPMWIRNTKHGWITAEYGMLPRSTGNRV-KREAVSGRQGGRSQ   88 (242)
Q Consensus        12 R~i~i~~g-~~~~a~GSa~v~~-G~T~Vl~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~-~~~~~~~~~~~~~~   88 (242)
                      |+|+++|| +.+||+||+.+++ |+|.|+|+|....+.+.   ..+...+.++|.--.++....+ ++...++++.++++
T Consensus        37 r~l~~EtGklAkqA~GSvvv~~~G~TvvL~Tv~~~~~~~~---~~DF~PLtVdY~EK~yAaGKIPGgF~KREGrpsd~Ei  113 (757)
T 1e3p_A           37 RTIRFETGRLARQAAGSAVAYLDDDTMVLSATTASKNPKD---QLDFFPLTVDVEERMYAAGKIPGSFFRREGRPSEDAI  113 (757)
T ss_dssp             EEEEEEESSSCTTSSEEEEEEETTTEEEEEEEEEEEEECT---TCSSCCEEEEEEECGGGGTCCCCSTTSSCCSCCHHHH
T ss_pred             EEEEEECCCHHHCCCCEEEEEECCCEEEEEEEECCCCCCC---CCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHH
T ss_conf             4799974610201784499998897899999953578889---9997530698988011277677877477889981365


Q ss_pred             HHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCHHHHCCCCCCCHHHCCCCCCCCCCCCEECCCCCCCCEEECCC
Q ss_conf             34444322421000220048802223442035557631010001222101100100000146310112437831020045
Q gi|254780630|r   89 EIQRMIGRALRSVVDLSALGSRQIIIDCDVIQADGGTRTAAITGAWVALHDCLQHMEDCSNKFQLSQVLKGHVAAISCGM  168 (242)
Q Consensus        89 ~~~~~~~~~l~~~~~~~~~~~~~i~i~v~v~~~dg~~~~a~~~a~~~Al~~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (242)
                      +.+|+++|.++|+++..++..+|+.+.|+.++.+......+++|+++||..+             ++|+..|..++.++.
T Consensus       114 L~sRLIDRplRPLFPkgf~~EtQIi~tVLS~D~~~~pDvlAi~aASAAL~iS-------------dIPf~GPVaaVRVG~  180 (757)
T 1e3p_A          114 LTCRLIDRPLRPSFKKGLRNEIQVVATIMALNPDHLYDVVAINAASASTQLA-------------GLPFSGPIGGVRVAL  180 (757)
T ss_dssp             HHHHHHHHHHGGGBCTTBCEEEEEEEEEEECCTTSCCHHHHHHHHHHHHHHT-------------TSSBCCCCEEEEEEE
T ss_pred             HHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHH-------------CCCCCCCEEEEEEEE
T ss_conf             7778756765467776788761899999983899890688999999999864-------------899789626899999


Q ss_pred             CCCCCEECCCCCCCCCCCEEEEEEECC----CCCEEEEEECCCCC----------CCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             455410033431012343036888759----98689999218636----------8689999999999999999999999
Q gi|254780630|r  169 LCGYPIVDLDYGEDSTIDVDANFVMTD----SGHIVEVQGSAERA----------TFSQDHFFAMLNLAKDRIADLIKLQ  234 (242)
Q Consensus       169 ~~~~~~~d~~~~ee~~~~~~l~v~~~~----~~~i~~i~~~g~~~----------~~~~~~l~~~l~~a~~~~~~i~~~i  234 (242)
                      .++.++++|+.+|...++.+|.++++.    ...|.+++..+.+.          .++++++.++++.|++.++++.+++
T Consensus       181 idGefViNPT~eele~S~LDLvVAGT~~~~~~~aI~MVEa~a~e~s~~mve~ga~~vsEe~m~~Ai~~a~~~Ik~ii~~q  260 (757)
T 1e3p_A          181 IRGQWVAFPTHTELEDAVFDMVVAGRVLEDGDVAIMMVEAEATEKTIQLVKDGAEAPTEEVVAAGLDAAKPFIKVLCKAQ  260 (757)
T ss_dssp             ETTEEEESCCHHHHTTEEEEEEEEEEECTTSCEEEEEEEEEECSSHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ECCEEEECCCCCHHHCCCEEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99989978983331126212577313355522566666520440057777644311239999999999868899999999


Q ss_pred             HHHHH
Q ss_conf             99977
Q gi|254780630|r  235 KDVIS  239 (242)
Q Consensus       235 ~~~L~  239 (242)
                      ++..+
T Consensus       261 ~el~~  265 (757)
T 1e3p_A          261 ADLAA  265 (757)
T ss_dssp             HHHHH
T ss_pred             HHHHH
T ss_conf             99999