HHsearch results for GI: 254780630 and protein with PDBid: 1e3p_A
>1e3p_A Guanosine pentaphosphate synthetase; polyribonucleotide transferase, ATP-GTP diphosphotransferase RNA processing, RNA degradation; 2.5A {Streptomyces antibioticus} SCOP: a.4.9.1 b.40.4.5 d.14.1.4 d.14.1.4 d.52.3.1 d.101.1.1 d.101.1.1 PDB: 1e3h_A
Probab=99.95 E-value=6e-27 Score=169.15 Aligned_cols=212 Identities=18% Similarity=0.128 Sum_probs=176.7
Q ss_pred EEEEEEEC-CCCCCCCEEEEEE-CCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCC-CCCCCCCCCCCCHH
Q ss_conf 87999976-6326882899996-894899999933324531015543421100100555653222-33344447773102
Q gi|254780630|r 12 REISLTRR-VSKYAEGSCLVKF-GDTHLLTTATLEEKVPMWIRNTKHGWITAEYGMLPRSTGNRV-KREAVSGRQGGRSQ 88 (242)
Q Consensus 12 R~i~i~~g-~~~~a~GSa~v~~-G~T~Vl~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~-~~~~~~~~~~~~~~ 88 (242)
|+|+++|| +.+||+||+.+++ |+|.|+|+|....+.+. ..+...+.++|.--.++....+ ++...++++.++++
T Consensus 37 r~l~~EtGklAkqA~GSvvv~~~G~TvvL~Tv~~~~~~~~---~~DF~PLtVdY~EK~yAaGKIPGgF~KREGrpsd~Ei 113 (757)
T 1e3p_A 37 RTIRFETGRLARQAAGSAVAYLDDDTMVLSATTASKNPKD---QLDFFPLTVDVEERMYAAGKIPGSFFRREGRPSEDAI 113 (757)
T ss_dssp EEEEEEESSSCTTSSEEEEEEETTTEEEEEEEEEEEEECT---TCSSCCEEEEEEECGGGGTCCCCSTTSSCCSCCHHHH
T ss_pred EEEEEECCCHHHCCCCEEEEEECCCEEEEEEEECCCCCCC---CCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHH
T ss_conf 4799974610201784499998897899999953578889---9997530698988011277677877477889981365
Q ss_pred HHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCHHHHCCCCCCCHHHCCCCCCCCCCCCEECCCCCCCCEEECCC
Q ss_conf 34444322421000220048802223442035557631010001222101100100000146310112437831020045
Q gi|254780630|r 89 EIQRMIGRALRSVVDLSALGSRQIIIDCDVIQADGGTRTAAITGAWVALHDCLQHMEDCSNKFQLSQVLKGHVAAISCGM 168 (242)
Q Consensus 89 ~~~~~~~~~l~~~~~~~~~~~~~i~i~v~v~~~dg~~~~a~~~a~~~Al~~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (242)
+.+|+++|.++|+++..++..+|+.+.|+.++.+......+++|+++||..+ ++|+..|..++.++.
T Consensus 114 L~sRLIDRplRPLFPkgf~~EtQIi~tVLS~D~~~~pDvlAi~aASAAL~iS-------------dIPf~GPVaaVRVG~ 180 (757)
T 1e3p_A 114 LTCRLIDRPLRPSFKKGLRNEIQVVATIMALNPDHLYDVVAINAASASTQLA-------------GLPFSGPIGGVRVAL 180 (757)
T ss_dssp HHHHHHHHHHGGGBCTTBCEEEEEEEEEEECCTTSCCHHHHHHHHHHHHHHT-------------TSSBCCCCEEEEEEE
T ss_pred HHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHH-------------CCCCCCCEEEEEEEE
T ss_conf 7778756765467776788761899999983899890688999999999864-------------899789626899999
Q ss_pred CCCCCEECCCCCCCCCCCEEEEEEECC----CCCEEEEEECCCCC----------CCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 455410033431012343036888759----98689999218636----------8689999999999999999999999
Q gi|254780630|r 169 LCGYPIVDLDYGEDSTIDVDANFVMTD----SGHIVEVQGSAERA----------TFSQDHFFAMLNLAKDRIADLIKLQ 234 (242)
Q Consensus 169 ~~~~~~~d~~~~ee~~~~~~l~v~~~~----~~~i~~i~~~g~~~----------~~~~~~l~~~l~~a~~~~~~i~~~i 234 (242)
.++.++++|+.+|...++.+|.++++. ...|.+++..+.+. .++++++.++++.|++.++++.+++
T Consensus 181 idGefViNPT~eele~S~LDLvVAGT~~~~~~~aI~MVEa~a~e~s~~mve~ga~~vsEe~m~~Ai~~a~~~Ik~ii~~q 260 (757)
T 1e3p_A 181 IRGQWVAFPTHTELEDAVFDMVVAGRVLEDGDVAIMMVEAEATEKTIQLVKDGAEAPTEEVVAAGLDAAKPFIKVLCKAQ 260 (757)
T ss_dssp ETTEEEESCCHHHHTTEEEEEEEEEEECTTSCEEEEEEEEEECSSHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ECCEEEECCCCCHHHCCCEEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99989978983331126212577313355522566666520440057777644311239999999999868899999999
Q ss_pred HHHHH
Q ss_conf 99977
Q gi|254780630|r 235 KDVIS 239 (242)
Q Consensus 235 ~~~L~ 239 (242)
++..+
T Consensus 261 ~el~~ 265 (757)
T 1e3p_A 261 ADLAA 265 (757)
T ss_dssp HHHHH
T ss_pred HHHHH
T ss_conf 99999