HHsearch results for GI: 254780630 and protein with PDBid: 2wnr_B
>2wnr_B Probable exosome complex exonuclease 1; phosphate binding, 3'-5' exoribonuclease, hydrolase; 2.65A {Methanothermobacterthermautotrophicus}
Probab=100.00 E-value=0 Score=288.66 Aligned_cols=221 Identities=26% Similarity=0.369 Sum_probs=198.3
Q ss_pred CCCCCCCCCCEEEEEEEECCCCCCCCEEEEEECCCEEEEEEEECCCCC-CCCCCCCCCCCCEEEEECCCCCCCCCCCCCC
Q ss_conf 967899801178799997663268828999968948999999333245-3101554342110010055565322233344
Q gi|254780630|r 1 MRLSGRQENQMREISLTRRVSKYAEGSCLVKFGDTHLLTTATLEEKVP-MWIRNTKHGWITAEYGMLPRSTGNRVKREAV 79 (242)
Q Consensus 1 iR~DGR~~~e~R~i~i~~g~~~~a~GSa~v~~G~T~Vl~~V~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 79 (242)
||+|||+++|+|++++++|++++|||||+|++|+|+|+|+|++|.+.+ +..+.++++.+.+++.+.|++...+...
T Consensus 16 iR~DGR~~~e~R~i~i~~g~l~~adGSa~v~~G~T~Vl~~V~~~~e~~~~~~~~~~~~~l~~~~~~~~~s~~~~~~~--- 92 (240)
T 2wnr_B 16 VREDGRAFDELRPLKIEAGILERADGSSYLEFGGNKILVAVYGPREAQIRKLQRPDRAVIRCRYNMAPFSVEERKRP--- 92 (240)
T ss_dssp CCTTSCCTTCCCCEEEEESCCSSSSEEEEEEETTEEEEEEEEEEEECCSSSSCCSSSCEEEEEEEECTTSSSSCCCS---
T ss_pred CCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCEEEEEEECCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCC---
T ss_conf 48999598883085999598899865899998990999997866334544224797589999994177664554578---
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCHHHHCCCCCCCHHHCCCCCCCCCCCCEECCCCC
Q ss_conf 44777310234444322421000220048802223442035557631010001222101100100000146310112437
Q gi|254780630|r 80 SGRQGGRSQEIQRMIGRALRSVVDLSALGSRQIIIDCDVIQADGGTRTAAITGAWVALHDCLQHMEDCSNKFQLSQVLKG 159 (242)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~i~v~v~~~dg~~~~a~~~a~~~Al~~a~i~~~~~~~~~~~~~~~~~ 159 (242)
....++.+.++.+.+++++.+..+.+|+++|.++++++++||++++++++|+++||.|+++|+.+
T Consensus 93 --~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~i~V~v~vL~~DG~~~~aai~aa~lAL~dagip~~~------------- 157 (240)
T 2wnr_B 93 --GPDRRSVEISKITAEALRPALILEKFPRSVIDVFIEVLEAEGGTRCAGITAASVALADAGIPMRD------------- 157 (240)
T ss_dssp --SCCHHHHHHHHHHHHHHGGGBCGGGSTTEEEEEEEEEEECCSCHHHHHHHHHHHHHHHTTCCBSS-------------
T ss_pred --CCCHHHHHHHHHHHHHHCCCCCHHHCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCC-------------
T ss_conf --98457789999998764254468888977999999996589991897646889999976997325-------------
Q ss_pred CCCEEECCCCCCCCEECCCCCCCCCCCEEEEEEE-CCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8310200454554100334310123430368887-599868999921863686899999999999999999999999997
Q gi|254780630|r 160 HVAAISCGMLCGYPIVDLDYGEDSTIDVDANFVM-TDSGHIVEVQGSAERATFSQDHFFAMLNLAKDRIADLIKLQKDVI 238 (242)
Q Consensus 160 ~~~~~~~~~~~~~~~~d~~~~ee~~~~~~l~v~~-~~~~~i~~i~~~g~~~~~~~~~l~~~l~~a~~~~~~i~~~i~~~L 238 (242)
++++++++..++.+++||+.+||..+++.+++++ ++.++++++++.| .++++++.+|+++|.+++++|+++|+++|
T Consensus 158 ~v~avsv~~~~~~~ivDpt~~Ee~~~~~~~~v~~~~~~~~i~~~~~~G---~~~~~~l~~~l~~A~~~~~~l~~~~~~~l 234 (240)
T 2wnr_B 158 MVVACAAGKVGDQVVLDLSEEEDKEGQADVPVAILPRTREITLLQSDG---NLTPEEFERALDLAVEGCLRIHEVQKEAL 234 (240)
T ss_dssp CCEEEEEEESSSSEEESCCSHHHHSCSEEEEEEEETTTTEEEEEEEEE---CBCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEEEECCEEEECCCHHHHHHCCCCEEEEEECCCCCEEEEEEEC---CCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 321689997799588479978874147510289991699389999306---53999999999999999999999999997
Q ss_pred HHCC
Q ss_conf 7209
Q gi|254780630|r 239 SNEV 242 (242)
Q Consensus 239 ~~~~ 242 (242)
+++.
T Consensus 235 ~k~~ 238 (240)
T 2wnr_B 235 RKRY 238 (240)
T ss_dssp HC--
T ss_pred HHHH
T ss_conf 5765