HHsearch results for GI: 254780630 and protein with PDBid: 3b4t_A

>3b4t_A Ribonuclease PH; RNAse, tRNA nucleotidyltransferase, RPHA, structural genomics, TBSGC; 2.10A {Mycobacterium tuberculosis H37RV}
Probab=100.00  E-value=0  Score=299.61  Aligned_cols=240  Identities=46%  Similarity=0.739  Sum_probs=223.9

Q ss_pred             CCCCCCCCCCEEEEEEEECCCCCCCCEEEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC
Q ss_conf             96789980117879999766326882899996894899999933324531015543421100100555653222333444
Q gi|254780630|r    1 MRLSGRQENQMREISLTRRVSKYAEGSCLVKFGDTHLLTTATLEEKVPMWIRNTKHGWITAEYGMLPRSTGNRVKREAVS   80 (242)
Q Consensus         1 iR~DGR~~~e~R~i~i~~g~~~~a~GSa~v~~G~T~Vl~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~   80 (242)
                      .|+|||+++|+|+|++++|++++|||||||++|||+|+|+|+||++.|.....+..+.+.......+++...+..+....
T Consensus         6 ~R~DGR~~~e~R~i~i~~G~l~~a~GSa~v~~G~T~Vl~~V~gp~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (262)
T 3b4t_A            6 KREDGRLDHELRPVIITRGFTENPAGSVLIEFGHTKVLCTASVTEGVPRWRKATGLGWLTAEYAMLPSATHSRSDRESVR   85 (262)
T ss_dssp             CSTTSCCTTCCCCEEEEETSSSSSSEEEEEEETTEEEEEEEEEEESCC----CCSCCEEEEEEEECGGGSSSCCCCHHHH
T ss_pred             CCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCEEEEEEECCCCCCHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCC
T ss_conf             18999798885575999697899987999998993999999857767601215666614777750345677677642123


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCHHHHCCCCCCCHHHCCCCCCCCCCCCEECCCCCC
Q ss_conf             47773102344443224210002200488022234420355576310100012221011001000001463101124378
Q gi|254780630|r   81 GRQGGRSQEIQRMIGRALRSVVDLSALGSRQIIIDCDVIQADGGTRTAAITGAWVALHDCLQHMEDCSNKFQLSQVLKGH  160 (242)
Q Consensus        81 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~i~v~v~~~dg~~~~a~~~a~~~Al~~a~i~~~~~~~~~~~~~~~~~~  160 (242)
                      .+...+.......+.+++++.+++..++.++|++++.++++||+..+++++++++|+.++.+++.+. .......|+.++
T Consensus        86 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~i~v~~l~~~g~~~~~~~~a~~~Al~~~~i~~~~~-~~~~~~~pl~~~  164 (262)
T 3b4t_A           86 GRLSGRTQEISRLIGRSLRACIDLAALGENTIAIDCDVLQADGGTRTAAITGAYVALADAVTYLSAA-GKLSDPRPLSCA  164 (262)
T ss_dssp             TSCCHHHHHHHHHHHHHHHTTBCHHHHCSEEEEEEEEEEECSSCHHHHHHHHHHHHHHHHHHHHHHT-TCCSSSCCBCSC
T ss_pred             CCCCHHHHHHHHHHHHHHHCCCCHHHCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHC-CCCCCCCCCCCC
T ss_conf             5633567877677765542026530158769999999974889704667788999998625421112-564435661144


Q ss_pred             CCEEECCCCCCCCEECCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             31020045455410033431012343036888759986899992186368689999999999999999999999999772
Q gi|254780630|r  161 VAAISCGMLCGYPIVDLDYGEDSTIDVDANFVMTDSGHIVEVQGSAERATFSQDHFFAMLNLAKDRIADLIKLQKDVISN  240 (242)
Q Consensus       161 ~~~~~~~~~~~~~~~d~~~~ee~~~~~~l~v~~~~~~~i~~i~~~g~~~~~~~~~l~~~l~~a~~~~~~i~~~i~~~L~~  240 (242)
                      ++++.+.+.++.++.||+.+|+..+++.+++++++++++|.+|++|+++.|++++|.+|+++|.++|++|+++||++|+.
T Consensus       165 ~~~~~~~~~~~~~~~Dpt~~Ee~~~~~~l~va~~~~g~i~~i~~~g~~~~~~~e~l~~~i~~A~~~~~~l~~~lk~~l~~  244 (262)
T 3b4t_A          165 IAAVSVGVVDGRIRVDLPYEEDSRAEVDMNVVATDTGTLVEIQGTGEGATFARSTLDKLLDMALGACDTLFAAQRDALAL  244 (262)
T ss_dssp             EEEEEEEEETTEEEESCCHHHHTTCSEEEEEEEETTSCEEEEEECSSCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEECCCEEEECCCCCHHCCCCEEEEEEECCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             22224540352375245421000464479999879997999986057787399999999999999999999999998611


Q ss_pred             C
Q ss_conf             0
Q gi|254780630|r  241 E  241 (242)
Q Consensus       241 ~  241 (242)
                      +
T Consensus       245 k  245 (262)
T 3b4t_A          245 P  245 (262)
T ss_dssp             C
T ss_pred             C
T ss_conf             1