PSIBLAST alignment of GI: 254780630 and protein with PDB id: 2br2
gi|71042716|pdb|2BR2|A Chain A, Rnase Ph Core Of The Archaeal Exosome Length = 275
>gi|71042718|pdb|2BR2|C Chain C, Rnase Ph Core Of The Archaeal Exosome Length = 275
>gi|71042720|pdb|2BR2|E Chain E, Rnase Ph Core Of The Archaeal Exosome Length = 275
>gi|71042722|pdb|2BR2|G Chain G, Rnase Ph Core Of The Archaeal Exosome Length = 275
>gi|71042724|pdb|2BR2|I Chain I, Rnase Ph Core Of The Archaeal Exosome Length = 275
>gi|71042726|pdb|2BR2|K Chain K, Rnase Ph Core Of The Archaeal Exosome Length = 275
>gi|71042728|pdb|2BR2|M Chain M, Rnase Ph Core Of The Archaeal Exosome Length = 275
>gi|71042730|pdb|2BR2|O Chain O, Rnase Ph Core Of The Archaeal Exosome Length = 275
>gi|71042732|pdb|2BR2|Q Chain Q, Rnase Ph Core Of The Archaeal Exosome Length = 275
>gi|71042734|pdb|2BR2|S Chain S, Rnase Ph Core Of The Archaeal Exosome Length = 275
>gi|71042736|pdb|2BR2|U Chain U, Rnase Ph Core Of The Archaeal Exosome Length = 275
>gi|71042738|pdb|2BR2|W Chain W, Rnase Ph Core Of The Archaeal Exosome Length = 275
>gi|83754538|pdb|2C37|A Chain A, Rnase Ph Core Of The Archaeal Exosome In Complex With U8 Rna Length = 275
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 57/255 (22%), Positives = 94/255 (36%), Gaps = 23/255 (9%)
Query: 1 MRLSGRQENQMREISLTRRVSKYAEGSCLVKFGDTHLLTTATLEEKVPMWIRNTKHGWIT 60
+R GR+ R +S+T +K A+GS LVK G T +L LE P + G +
Sbjct: 27 IRQDGRKLTDYRPLSITLDYAKKADGSALVKLGTTMVLAGTKLEIDKP-YEDTPNQGNLI 85
Query: 61 AEYGMLPRSTGNRVKREAVSGRQGGRSQEIQRMIGRALRSVVDLSALG--------SRQI 112
+LP + G + E+ R++ R+LR L +
Sbjct: 86 VNVELLPLAYETFEP-----GPPDENAIELARVVDRSLRDSKALDLTKLVIEPGKSVWTV 140
Query: 113 IIDCDVIQADGGTRTAAITGAWVALHDCLQHMEDCSNKFQL--------SQVLKGHVAAI 164
+D V+ G A + AL++ + + + L V I
Sbjct: 141 WLDVYVLDYGGNVLDACTLASVAALYNTKVYKVEQHSNGISVNKNEVVGKLPLNYPVVTI 200
Query: 165 SCGMLCGYPIVDLDYGEDSTIDVDANFVMTDSGHIVEVQGSAERATFSQDHFFAMLNLAK 224
S + Y +VD D E+S +D +F T IV +Q S + + S N A+
Sbjct: 201 SVAKVDKYLVVDPDLDEESIMDAKISFSYTPDLKIVGIQKSGK-GSMSLQDIDQAENTAR 259
Query: 225 DRIADLIKLQKDVIS 239
L++ K +
Sbjct: 260 STAVKLLEELKKHLG 274