PSIBLAST alignment of GI: 254780630 and protein with PDB id: 2nn6
>gi|122920908|pdb|2NN6|B Chain B, Structure Of The Human Rna Exosome Composed Of Rrp41, Rrp45, Rrp46, Rrp43, Mtr3, Rrp42, Csl4, Rrp4, And Rrp40 Length = 249
Score = 108 bits (269), Expect = 8e-22, Method: Composition-based stats.
Identities = 56/244 (22%), Positives = 92/244 (37%), Gaps = 23/244 (9%)
Query: 2 RLSGRQENQMREISLTRRVSKYAEGSCLVKFGDTHLLTTATLEEKVP--MWIRNTKHGWI 59
R+ GR+ ++R+I V A+GS ++ G+T L ++ +
Sbjct: 17 RVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEIRGSRARALPDRALV 76
Query: 60 TAEYGMLPRSTGNRVKREAVSGRQGGRSQEIQRMIGRALRSVVDLSALGSRQIIIDCDVI 119
+Y STG R +R + S E+ + + + + QI I V+
Sbjct: 77 NCQYSSATFSTGERKRRPHGDRK----SCEMGLQLRQTFEAAILTQLHPRSQIDIYVQVL 132
Query: 120 QADGGTRTAAITGAWVALHDCLQHMEDCSNKFQLSQVLKGHVAAISCGMLCGYPIVDLDY 179
QADGGT A + A +A+ D M D V A S G + G + DL +
Sbjct: 133 QADGGTYAACVNAATLAVLDAGIPMRDF-------------VCACSAGFVDGTALADLSH 179
Query: 180 GEDSTIDVDANFV-MTDSGHIVEVQGSAERATFSQDHFFAMLNLAKDRIADLIKLQKDVI 238
E++ + SG I ++ A +DH +L A D+ L V+
Sbjct: 180 VEEAAGGPQLALALLPASGQIALLEMDAR---LHEDHLERVLEAAAQAARDVHTLLDRVV 236
Query: 239 SNEV 242
V
Sbjct: 237 RQHV 240