RPSBLAST alignment of GI: 254780630 and protein with PDBid: 2po1
>2po1_B Probable exosome complex exonuclease 2; RNAse PH, hydrolase/hydrolase/RNA complex; 1.94A {Pyrococcus abyssi} PDB: 2po0_B* 2pnz_B 2po2_B* Length = 277
Score = 136 bits (343), Expect = 4e-33
Identities = 46/248 (18%), Positives = 80/248 (32%), Gaps = 11/248 (4%)
Query: 2 RLSGRQENQMREISLTRRVSKYAEGSCLVKFGDTHLLTTATLEEKVPMWIRNTKHGWITA 61
R+ R R I + V + AEGS LVK G T +L P T
Sbjct: 27 RIDDRGFEDYRPIEIEVGVIEKAEGSALVKLGSTQVLVGIKTSLGEPFPDTPNMGVMTTN 86
Query: 62 EYGMLPRSTGNRVKREAVSGRQGGR--SQEIQRMIGRALRSVVDLSALGSRQIIIDCDVI 119
+ S + R + I+ L +V + R + ID V+
Sbjct: 87 VELVPLASPTFEPGPPDERAIELARVIDRGIRESKALNLEKMVIVPGKIVRVVFIDVHVL 146
Query: 120 QADGGTRTAAITGAWVALHDCLQHMEDCSNKFQLSQV--------LKGHVAAISCGMLCG 171
DG A A AL + + + + ++ ++ +
Sbjct: 147 DHDGNLMDAIGIAAIAALLNARVPKVRYNEETGEVETLDETEPLPVEKIPVPVTFAKIGN 206
Query: 172 YPIVDLDYGEDSTIDVDANFVMTDSGHIVEVQGSAERATFSQDHFFAMLNLAKDRIADLI 231
+VD E+ +D ++GHI VQ +E F + + A + ++
Sbjct: 207 ILVVDPSLDEELVMDGKITITTDETGHISAVQ-KSEGGAFKLEEVMYAVETAFKKAEEIR 265
Query: 232 KLQKDVIS 239
KL + +
Sbjct: 266 KLILEAVE 273