RPSBLAST alignment of GI: 254780630 and protein with PDBid: 2wnr
>2wnr_B Probable exosome complex exonuclease 1; phosphate binding, 3'-5' exoribonuclease, hydrolase; 2.65A {Methanothermobacterthermautotrophicus} Length = 240
Score = 172 bits (436), Expect = 7e-44
Identities = 57/240 (23%), Positives = 97/240 (40%), Gaps = 23/240 (9%)
Query: 2 RLSGRQENQMREISLTRRVSKYAEGSCLVKFGDTHLLTTATLEEKVPM-WIRNTKHGWIT 60
R GR +++R + + + + A+GS ++FG +L + + ++ I
Sbjct: 17 REDGRAFDELRPLKIEAGILERADGSSYLEFGGNKILVAVYGPREAQIRKLQRPDRAVIR 76
Query: 61 AEYGMLPRSTGNRVKREAVSGRQGGRSQEIQRMIGRALRSVVDLSALGSRQIIIDCDVIQ 120
Y M P S R + RS EI ++ ALR + L I + +V++
Sbjct: 77 CRYNMAPFSVEERKRP-----GPDRRSVEISKITAEALRPALILEKFPRSVIDVFIEVLE 131
Query: 121 ADGGTRTAAITGAWVALHDCLQHMEDCSNKFQLSQVLKGHVAAISCGMLCGYPIVDLDYG 180
A+GGTR A IT A VAL D M D V A + G + ++DL
Sbjct: 132 AEGGTRCAGITAASVALADAGIPMRDM-------------VVACAAGKVGDQVVLDLSEE 178
Query: 181 EDSTIDVDANFVMT-DSGHIVEVQGSAERATFSQDHFFAMLNLAKDRIADLIKLQKDVIS 239
ED D + + I +Q + + F L+LA + + ++QK+ +
Sbjct: 179 EDKEGQADVPVAILPRTREITLLQSDGN---LTPEEFERALDLAVEGCLRIHEVQKEALR 235