RPSBLAST alignment of GI: 254780630 and protein with PDBid: 2wp8
>2wp8_B Exosome complex component SKI6; nucleus, hydrolase, cytoplasm, RNA-binding, RNA binding, mitochondrion, rRNA processing; 3.00A {Saccharomyces cerevisiae} Length = 246
Score = 111 bits (279), Expect = 1e-25
Identities = 45/241 (18%), Positives = 87/241 (36%), Gaps = 21/241 (8%)
Query: 1 MRLSGRQENQMREISLTR-RVSKYAEGSCLVKFGDTHLLTTATLE-EKVPMWIRNTKHGW 58
+RL GR+ N++R + A+GS ++ G+ ++T E +T
Sbjct: 12 LRLDGRRWNELRRFESSINTHPHAADGSSYMEQGNNKIITLVKGPKEPRLKSQMDTSKAL 71
Query: 59 ITAEYGMLPRSTGNRVKREAVSGRQGGRSQEIQRMIGRALRSVVDLSALGSRQIIIDCDV 118
+ + S R K S + R EIQ + R V L+ I I+ V
Sbjct: 72 LNVSVNINKFSKFERSKS---SHKNERRVLEIQTSLVRMFEKNVMLNIYPRTVIDIEIHV 128
Query: 119 IQADGGTRTAAITGAWVALHDCLQHMEDCSNKFQLSQVLKGHVAAISCGMLCGYPIVDLD 178
++ DGG + I G +AL D M +++ IS G+ P++D +
Sbjct: 129 LEQDGGIMGSLINGITLALIDAGISM-------------FDYISGISVGLYDTTPLLDTN 175
Query: 179 YGEDSTIDVDANFVMTDSGHIVEVQGSAERATFSQDHFFAMLNLAKDRIADLIKLQKDVI 238
E++ + + + + ++ D +L + + L + +
Sbjct: 176 SLEENAMS-TVTLGVVGKSEKLSLLLVEDKIPL--DRLENVLAIGIAGAHRVRDLMDEEL 232
Query: 239 S 239
Sbjct: 233 R 233