RPSBLAST alignment of GI: 254780630 and protein with PDBid: 3hkm
>3hkm_A OS03G0854200 protein; RNAse PH domain, phosphorylase; 1.98A {Oryza sativa japonica group} Length = 246
Score = 154 bits (390), Expect = 2e-38
Identities = 49/256 (19%), Positives = 84/256 (32%), Gaps = 41/256 (16%)
Query: 2 RLSGRQENQMREISLTRRVSKYAEGSCLVKFGDTHLLTTATLEEKVPMWIRNTKHGWITA 61
R GR NQ+R S TR A GS GDT +L P + +
Sbjct: 5 RADGRNPNQLRPFSCTRNPLDRAHGSARWAQGDTIVLAAVY--GPKPGTRKGENPEKASI 62
Query: 62 EYGMLPRSTGNRVKREAVSGRQGGRSQEIQRMIGRALRSVVDLSALGSRQIIIDCDVIQA 121
E P +G+ G + +E + + R L+S+ L+ + + V+
Sbjct: 63 EVVWKPM-----------TGQIGKQEKEYEMTLKRTLQSICLLTVHPNTTTSVILQVVGN 111
Query: 122 DGGTRTAAITGAWVALHDCLQHMEDCSNKFQLSQVLKGHVAAISCGMLC-GYPIVDLDYG 180
DG AI AL LK AI CG+L G I+D +
Sbjct: 112 DGSLLPCAINACCAALVFA-------------GIPLKHLAVAIGCGVLEDGEVILDTNKA 158
Query: 181 EDSTIDVDANFVMTDSGHIVEVQGSAE--------------RATFSQDHFFAMLNLAKDR 226
E+ + A+ V +S + + S++ +F+ +
Sbjct: 159 EEQQLKSFAHLVFPNSRKSASSKEPNQKEEDSERGLITSITHGVMSEEDYFSCIERGLAA 218
Query: 227 IADLIKLQKDVISNEV 242
+ + + + +
Sbjct: 219 SSRISDFMRTTLQKQA 234