RPSBLAST alignment of GI: 254780630 and protein with PDBid: 3m7n
>3m7n_G Probable exosome complex exonuclease 2; exosome, RNA, exonuclease, hydrolase, nuclease, hydrolase-RN; 2.40A {Archaeoglobus fulgidus} PDB: 2ba1_H 2ba0_I 3m85_G Length = 259
Score = 155 bits (391), Expect = 1e-38
Identities = 50/245 (20%), Positives = 95/245 (38%), Gaps = 15/245 (6%)
Query: 1 MRLSGRQENQMREISLTRRVSKYAEGSCLVKFGDTHLLTTATLEEKVPMWIRNTKHGWIT 60
R+ GR ++ R++ + V + AEGS LVK GDT ++ ++ P + G I
Sbjct: 22 ERIDGRGFDEFRKVEIIPNVIEKAEGSALVKLGDTQVVVGVKMQPGEPYPDTPDR-GVII 80
Query: 61 AEYGMLPRSTGNRVKREAVSGRQGGRSQEIQRMIGRALRS--VVDLSAL------GSRQI 112
++P ++ G S E+ R++ R +R VDLS L +
Sbjct: 81 VNAELVPLASPTFE-----PGPPDENSIELARVVDRGIRESEAVDLSKLVIEEGEKVWIV 135
Query: 113 IIDCDVIQADGGTRTAAITGAWVALHDCLQHMEDCSNKFQLSQVLKGHVAAISCGMLCGY 172
+D + DG A+ A AL + E ++ +++ ++
Sbjct: 136 FVDIHALDDDGNLLDASALAAIAALMNTKVPAERFDLGEDYLLPVRDLPVSVTSLIVGNK 195
Query: 173 PIVDLDYGEDSTIDVDANFVMTDSGHIVEVQGSAERATFSQDHFFAMLNLAKDRIADLIK 232
+VD E S D ++V +Q S + F +L+++ + L +
Sbjct: 196 YLVDPSREEMSVGDTTLTITTDKDDNVVAMQKSGG-YLLDEKLFDELLDVSINCARKLRE 254
Query: 233 LQKDV 237
K++
Sbjct: 255 KFKEI 259