RPSBLAST alignment of GI: 254780630 and SCOP domain: d2nn6e1

Alignment
>d2nn6e1 d.14.1.4 (E:5-191) Exosome complex exonuclease RRP42 {Human (Homo sapiens) [TaxId: 9606]} Length = 187
 Score =  104 bits (261), Expect = 6e-24
 Identities = 29/147 (19%), Positives = 47/147 (31%), Gaps = 14/147 (9%)

Query: 1   MRLSGRQENQMREISLTRRVSKYAEGSCLVKFGDTHLLTTATLEEKVPMWIRNTKHGWIT 60
           +R+ GR     R + +   V     GS  VK G T +L     E   P   +  + G++ 
Sbjct: 18  LRVDGRGCEDYRCVEVETDVVSNTSGSARVKLGHTDILVGVKAEMGTPKLEKPNE-GYLE 76

Query: 61  AEYGMLPRSTGNRVKREAVSGRQGGRSQEIQRMIGRALRSV--VDLSALG------SRQI 112
                   +T     R            EI   + R   +   VDL  L          +
Sbjct: 77  FFVDCSASATPEFEGR-----GGDDLGTEIANTLYRIFNNKSSVDLKTLCISPREHCWVL 131

Query: 113 IIDCDVIQADGGTRTAAITGAWVALHD 139
            +D  +++  G    A       AL +
Sbjct: 132 YVDVLLLECGGNLFDAISIAVKAALFN 158

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Ribosomal protein S5 domain 2-like
superfamily: Ribosomal protein S5 domain 2-like
family: Ribonuclease PH domain 1-like
domain: Exosome complex exonuclease RRP42
species: Human (Homo sapiens) [TaxId: 9606]