HHsearch alignment for GI: 254780634 and conserved domain: COG0116
>COG0116 Predicted N6-adenine-specific DNA methylase [DNA replication, recombination, and repair].
Probab=96.75 E-value=0.027 Score=35.38 Aligned_cols=125 Identities=14% Similarity=0.181 Sum_probs=85.2
Q ss_pred CCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCC-------------------------------C-------EEHHHHC
Q ss_conf 2112366666258601346882799999986168-------------------------------8-------1005524
Q gi|254780634|r 223 VSNLTAITNSSQILDFCAGGGGKTLALSMLLNNK-------------------------------G-------QIHAWDN 264 (429)
Q Consensus 223 ~~~~l~~~~g~~vLD~CAapGGKt~~la~~~~~~-------------------------------g-------~i~A~D~ 264 (429)
T Consensus 183 il~lagw~~~~pl~DPmCGSGTi~IEAAl~~~niAPg~~R~~~f~~w~~~~~~lw~~~~~ea~~~a~~~~~~~~~~G~Di 262 (381)
T COG0116 183 ILLLAGWKPDEPLLDPMCGSGTILIEAALIAANIAPGLNRRFGFEFWDWFDKDLWDKLREEAEERARRGKELPIIYGSDI 262 (381)
T ss_pred HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEECC
T ss_conf 99973999998341688773479999997344568763322004554321388899999999998651476665898748
Q ss_pred CHHHHHHHHHHHHHCCCCC-CEEEECCCCCCCCC-CCCCEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
Q ss_conf 9899999999987502886-08821554344572-324678962754450444442236672496789999998789999
Q gi|254780634|r 265 NKSRMAPIVARIKRAGIHN-VQLHSSWESLRNLQ-EHFTTVLVDAPCSGTGTWRRRPDIKWRLSQKNLIERTEEQKKILE 342 (429)
Q Consensus 265 ~~~Rl~~l~~~~~r~g~~~-v~~~~~~~~~~~~~-~~fd~vl~DaPCSg~G~~rr~Pe~~w~~~~~~~~~~~~lQ~~iL~ 342 (429)
T Consensus 263 d~r~i~~Ak~NA~~AGv~d~I~f~~~d~~~l~~~~~~~gvvI~NPPYG---e---------Rlg~~--~~v~~LY~~fg~ 328 (381)
T COG0116 263 DPRHIEGAKANARAAGVGDLIEFKQADATDLKEPLEEYGVVISNPPYG---E---------RLGSE--ALVAKLYREFGR 328 (381)
T ss_pred CHHHHHHHHHHHHHCCCCCEEEEEECCHHHCCCCCCCCCEEEECCCCH---H---------HCCCH--HHHHHHHHHHHH
T ss_conf 989999999989976988328999744321668766699899589830---1---------11770--469999999999
Q ss_pred HHHHHHCCCCEEEEEECCC
Q ss_conf 9999608983899977588
Q gi|254780634|r 343 ESAQFVRPEGYLVYITCSI 361 (429)
Q Consensus 343 ~a~~~lk~gG~lvYsTCS~ 361 (429)
T Consensus 329 ~lk~~~~~ws~~v~tt~e~ 347 (381)
T COG0116 329 TLKRLLAGWSRYVFTTSED 347 (381)
T ss_pred HHHHHHCCCCEEEEECCHH
T ss_conf 9998725773699976677