HHsearch alignment for GI: 254780634 and conserved domain: COG0270

>COG0270 Dcm Site-specific DNA methylase [DNA replication, recombination, and repair].
Probab=91.09  E-value=0.36  Score=27.69  Aligned_cols=83  Identities=17%  Similarity=0.202  Sum_probs=55.5

Q ss_pred             CCEEEECCCCCCHHHHHHHHHHCCCCEEHHHHCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCC-CCCEEEECCCCC
Q ss_conf             6258601346882799999986168810055249899999999987502886088215543445723-246789627544
Q gi|254780634|r  232 SSQILDFCAGGGGKTLALSMLLNNKGQIHAWDNNKSRMAPIVARIKRAGIHNVQLHSSWESLRNLQE-HFTTVLVDAPCS  310 (429)
Q Consensus       232 g~~vLD~CAapGGKt~~la~~~~~~g~i~A~D~~~~Rl~~l~~~~~r~g~~~v~~~~~~~~~~~~~~-~fd~vl~DaPCS  310 (429)
T Consensus         3 ~~~~idLFsG~GG~~lGf~~a--gf~~~~a~Eid~~a~~ty~~n~~~-~~~-~~~di~~~~~~~~~~~~~DvligGpPCQ   78 (328)
T COG0270           3 KMKVIDLFAGIGGLSLGFEEA--GFEIVFANEIDPPAVATYKANFPH-GDI-ILGDIKELDGEALRKSDVDVLIGGPPCQ   78 (328)
T ss_pred             CCEEEEECCCCCHHHHHHHHC--CCEEEEEEECCHHHHHHHHHHCCC-CCC-HHHHHHHHCHHHCCCCCCCEEEECCCCC
T ss_conf             854998658756588999864--984899874698899999985888-742-0303766052223556763798589972


Q ss_pred             CCHHHHHH
Q ss_conf             50444442
Q gi|254780634|r  311 GTGTWRRR  318 (429)
Q Consensus       311 g~G~~rr~  318 (429)
T Consensus        79 ~FS~aG~r   86 (328)
T COG0270          79 DFSIAGKR   86 (328)
T ss_pred             CHHHHCCC
T ss_conf             13340776