HHsearch alignment for GI: 254780634 and conserved domain: COG0275
>COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis [Cell envelope biogenesis, outer membrane].
Probab=97.10 E-value=0.00089 Score=45.42 Aligned_cols=151 Identities=23% Similarity=0.269 Sum_probs=102.3
Q ss_pred CCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCEEHHHHCCHHHHHHHHHHHHHCCCCCCEEEECCC-----CCCC-C
Q ss_conf 211236666625860134688279999998616881005524989999999998750288608821554-----3445-7
Q gi|254780634|r 223 VSNLTAITNSSQILDFCAGGGGKTLALSMLLNNKGQIHAWDNNKSRMAPIVARIKRAGIHNVQLHSSWE-----SLRN-L 296 (429)
Q Consensus 223 ~~~~l~~~~g~~vLD~CAapGGKt~~la~~~~~~g~i~A~D~~~~Rl~~l~~~~~r~g~~~v~~~~~~~-----~~~~-~ 296 (429)
T Consensus 15 ~i~~L~~~~~giyiD~TlG~GGHS~~iL~~l~~~~~li~~DrD~~Ai~~a~~~l~~~~~-r~~~v~~~F~~l~~~l~~~~ 93 (314)
T COG0275 15 VVELLAPKPDGIYIDGTLGAGGHSRAILEKLPDLGRLIGIDRDPQAIAIAKERLKEFDG-RVTLVHGNFANLAEALKELG 93 (314)
T ss_pred HHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCCC-CEEEEECCHHHHHHHHHHCC
T ss_conf 99852648994799823777476899998589887089976898999999998530378-48999576878998887638
Q ss_pred CCCCCEEEECCCCCCC--------------HH--HHHH--------------HH------------HH-----------H
Q ss_conf 2324678962754450--------------44--4442--------------23------------66-----------7
Q gi|254780634|r 297 QEHFTTVLVDAPCSGT--------------GT--WRRR--------------PD------------IK-----------W 323 (429)
Q Consensus 297 ~~~fd~vl~DaPCSg~--------------G~--~rr~--------------Pe------------~~-----------w 323 (429)
T Consensus 94 i~~vDGiL~DLGVSS~QLD~~eRGFSf~~d~pLDMRMd~~~~lsA~evvN~~~e~~L~~I~~~yGEEr~arrIA~aIv~~ 173 (314)
T COG0275 94 IGKVDGILLDLGVSSPQLDDAERGFSFRKDGPLDMRMDQTQGLSAAEVVNTYSEEDLARIFKEYGEERFAKRIARAIVER 173 (314)
T ss_pred CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_conf 87222799953678320288767860278898656748888978999985599999999999845176689999999998
Q ss_pred HC-----CHHHH--------------------------------HHHHHHHHHHHHHHHHHHCCCCEEEEE-ECCCCHHH
Q ss_conf 24-----96789--------------------------------999998789999999960898389997-75888242
Q gi|254780634|r 324 RL-----SQKNL--------------------------------IERTEEQKKILEESAQFVRPEGYLVYI-TCSILPEE 365 (429)
Q Consensus 324 ~~-----~~~~~--------------------------------~~~~~lQ~~iL~~a~~~lk~gG~lvYs-TCS~~~~E 365 (429)
T Consensus 174 R~~~pi~tT~eLaeiI~~~~p~~~~~k~~hPAtr~FQAiRI~VNdEL~~L-~~~L~~a~~~L~~~GRl~VIsFHSLED-- 250 (314)
T COG0275 174 RKKKPIETTKELAEIIKSAIPAKEKRKKIHPATRTFQAIRIYVNDELEEL-EEALEAALDLLKPGGRLAVISFHSLED-- 250 (314)
T ss_pred HCCCCCCCHHHHHHHHHHHCCCHHCCCCCCCCHHHHHHHEEEEHHHHHHH-HHHHHHHHHHHCCCCEEEEEEECCHHH--
T ss_conf 62698766999999999867701113678950665634100005679999-999999999618896799999534289--
Q ss_pred CHHHHHHHHHHCCC
Q ss_conf 99989999985799
Q gi|254780634|r 366 NIQQINYFLSKNPH 379 (429)
Q Consensus 366 ne~vv~~fL~~~~~ 379 (429)
T Consensus 251 --RiVK~ff~~~s~ 262 (314)
T COG0275 251 --RIVKNFFKELSK 262 (314)
T ss_pred --HHHHHHHHHHCC
T ss_conf --999999998404