HHsearch alignment for GI: 254780634 and conserved domain: COG2226

>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism].
Probab=98.89  E-value=7.5e-09  Score=79.91  Aligned_cols=122  Identities=22%  Similarity=0.343  Sum_probs=94.3

Q ss_pred             CCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCEEHHHHCCHHHHHHHHHHHHHCCCCCCEEEECCC-CCCCCCCCCC
Q ss_conf             211236666625860134688279999998616881005524989999999998750288608821554-3445723246
Q gi|254780634|r  223 VSNLTAITNSSQILDFCAGGGGKTLALSMLLNNKGQIHAWDNNKSRMAPIVARIKRAGIHNVQLHSSWE-SLRNLQEHFT  301 (429)
Q Consensus       223 ~~~~l~~~~g~~vLD~CAapGGKt~~la~~~~~~g~i~A~D~~~~Rl~~l~~~~~r~g~~~v~~~~~~~-~~~~~~~~fd  301 (429)
T Consensus        43 ~i~~~~~~~g~~vLDva~GTGd~a~~~~k~~g-~g~v~~~D~s~~ML~~a~~k~~~~~~~~i~fv~~dAe~LPf~D~sFD  121 (238)
T COG2226          43 LISLLGIKPGDKVLDVACGTGDMALLLAKSVG-TGEVVGLDISESMLEVAREKLKKKGVQNVEFVVGDAENLPFPDNSFD  121 (238)
T ss_pred             HHHHHCCCCCCEEEEECCCCCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHCCCCCCEEEEEECHHHCCCCCCCCC
T ss_conf             99860789998799966873199999999658-84499997999999999987432476632799705654988887658


Q ss_pred             EEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHCHHH
Q ss_conf             78962754450444442236672496789999998789999999960898389997758882429998
Q gi|254780634|r  302 TVLVDAPCSGTGTWRRRPDIKWRLSQKNLIERTEEQKKILEESAQFVRPEGYLVYITCSILPEENIQQ  369 (429)
Q Consensus       302 ~vl~DaPCSg~G~~rr~Pe~~w~~~~~~~~~~~~lQ~~iL~~a~~~lk~gG~lvYsTCS~~~~Ene~v  369 (429)
T Consensus       122 ~vt~~---fgl---rnv~d----------------~~~aL~E~~RVlKpgG--~~~vle~~~p~~~~~  165 (238)
T COG2226         122 AVTIS---FGL---RNVTD----------------IDKALKEMYRVLKPGG--RLLVLEFSKPDNPVL  165 (238)
T ss_pred             EEEEE---EHH---HCCCC----------------HHHHHHHHHHHHCCCE--EEEEEECCCCCCCHH
T ss_conf             89865---123---52787----------------8999999987626874--999987689986016