HHsearch alignment for GI: 254780634 and conserved domain: KOG1540

>KOG1540 consensus.
Probab=98.50  E-value=1.4e-06  Score=64.45  Aligned_cols=140  Identities=17%  Similarity=0.285  Sum_probs=104.9

Q ss_pred             CCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCC-----CEEHHHHCCHHHHHHHHHHHHHCCCCC---CEEEECCC-C
Q ss_conf             42112366666258601346882799999986168-----810055249899999999987502886---08821554-3
Q gi|254780634|r  222 IVSNLTAITNSSQILDFCAGGGGKTLALSMLLNNK-----GQIHAWDNNKSRMAPIVARIKRAGIHN---VQLHSSWE-S  292 (429)
Q Consensus       222 l~~~~l~~~~g~~vLD~CAapGGKt~~la~~~~~~-----g~i~A~D~~~~Rl~~l~~~~~r~g~~~---v~~~~~~~-~  292 (429)
T Consensus        91 ~~v~~L~p~~~m~~lDvaGGTGDiaFril~~v~s~~~~~~~~V~v~Dinp~mL~vgkqRa~~~~l~~~~~~~w~~~dAE~  170 (296)
T KOG1540          91 MFVSKLGPGKGMKVLDVAGGTGDIAFRILRHVKSQFGDRESKVTVLDINPHMLAVGKQRAKKRPLKASSRVEWVEGDAED  170 (296)
T ss_pred             HHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCC
T ss_conf             76621587778758983477525677798761134577776179993898999999877751597768716999477010


Q ss_pred             CCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHCHHHHHH
Q ss_conf             44572324678962754450444442236672496789999998789999999960898389997758882429998999
Q gi|254780634|r  293 LRNLQEHFTTVLVDAPCSGTGTWRRRPDIKWRLSQKNLIERTEEQKKILEESAQFVRPEGYLVYITCSILPEENIQQINY  372 (429)
Q Consensus       293 ~~~~~~~fd~vl~DaPCSg~G~~rr~Pe~~w~~~~~~~~~~~~lQ~~iL~~a~~~lk~gG~lvYsTCS~~~~Ene~vv~~  372 (429)
T Consensus       171 LpFdd~s~D~yTi-----afG-IRN---------------~th~~k-~l~EAYRVLKpGGrf~---cLeFskv~~~~l~~  225 (296)
T KOG1540         171 LPFDDDSFDAYTI-----AFG-IRN---------------VTHIQK-ALREAYRVLKPGGRFS---CLEFSKVENEPLKW  225 (296)
T ss_pred             CCCCCCCCEEEEE-----ECC-EEC---------------CCCHHH-HHHHHHHHCCCCCEEE---EEECCCCCCHHHHH
T ss_conf             8999775115888-----421-114---------------787789-9999987527786799---99735454077899


Q ss_pred             HHHHCCCCEEEECCC
Q ss_conf             998579979941430
Q gi|254780634|r  373 FLSKNPHFSIDSIID  387 (429)
Q Consensus       373 fL~~~~~~~~~~~~~  387 (429)
T Consensus       226 fy~~ys-f~VlpvlG  239 (296)
T KOG1540         226 FYDQYS-FDVLPVLG  239 (296)
T ss_pred             HHHHHH-HHHHCHHH
T ss_conf             997122-23211055