HHsearch alignment for GI: 254780634 and conserved domain: PRK00121
>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed.
Probab=97.75 E-value=0.00028 Score=48.86 Aligned_cols=141 Identities=16% Similarity=0.220 Sum_probs=103.4
Q ss_pred CCCCEEEECCCCCCHHHHHHHHHHCCCCEEHHHHCCHHHHHHHHHHHHHCCCCCCEEEECCCCC--CC--CCCCCCEEEE
Q ss_conf 6662586013468827999999861688100552498999999999875028860882155434--45--7232467896
Q gi|254780634|r 230 TNSSQILDFCAGGGGKTLALSMLLNNKGQIHAWDNNKSRMAPIVARIKRAGIHNVQLHSSWESL--RN--LQEHFTTVLV 305 (429)
Q Consensus 230 ~~g~~vLD~CAapGGKt~~la~~~~~~g~i~A~D~~~~Rl~~l~~~~~r~g~~~v~~~~~~~~~--~~--~~~~fd~vl~ 305 (429)
T Consensus 53 ~~~p~~lEIGfG~G~~l~~~A~~~P~-~~fIGiE~~~~gv~~~~~~~~~~~l~Ni~i~~~da~~~l~~~~~~~s~~~i~i 131 (229)
T PRK00121 53 NDAPIHLEIGFGRGEFLVEMAKANPD-INFIGIEIHEPGVAKALKKIEEAGLKNLRLLCGDAVEVLEHFLPDGSLDRIYL 131 (229)
T ss_pred CCCCEEEEECCCCCHHHHHHHHHCCC-CCEEEEEEEHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHCCCCCCCEEEE
T ss_conf 99943999615896999999986888-86899996169999999999982998389883478999997146454140467
Q ss_pred CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHCHHHHHHHHHHCCCCEEEEC
Q ss_conf 27544504444422366724967899999987899999999608983899977588824299989999985799799414
Q gi|254780634|r 306 DAPCSGTGTWRRRPDIKWRLSQKNLIERTEEQKKILEESAQFVRPEGYLVYITCSILPEENIQQINYFLSKNPHFSIDSI 385 (429)
Q Consensus 306 DaPCSg~G~~rr~Pe~~w~~~~~~~~~~~~lQ~~iL~~a~~~lk~gG~lvYsTCS~~~~Ene~vv~~fL~~~~~~~~~~~ 385 (429)
T Consensus 132 ~FPDP----WpKkrH~KR----------Rli~~~fl~~~~~~Lk~~G~i~~~TD~~~Y~---~~~~e~~~~~~~f~~~~~ 194 (229)
T PRK00121 132 NFPDP----WPKKRHHKR----------RLVQPEFLELYARVLKPGGEFHFATDWEEYA---EYMLEVFGAHPGFKNLDL 194 (229)
T ss_pred CCCCC----CCCCCCCCC----------CCCCHHHHHHHHHHCCCCCEEEEEECCHHHH---HHHHHHHHHCCCCEECCC
T ss_conf 17999----976320240----------1289999999998579998899981879999---999999986869374267
Q ss_pred CCC
Q ss_conf 300
Q gi|254780634|r 386 IDD 388 (429)
Q Consensus 386 ~~~ 388 (429)
T Consensus 195 ~~~ 197 (229)
T PRK00121 195 ADD 197 (229)
T ss_pred CCC
T ss_conf 877