HHsearch alignment for GI: 254780634 and conserved domain: PRK00517
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed.
Probab=98.35 E-value=2.3e-05 Score=56.16 Aligned_cols=143 Identities=15% Similarity=0.225 Sum_probs=97.9
Q ss_pred HHCCCEEEEECCCCCCCCCCCC--CCCCCEEEECCCCCCHHHHHHHHHHCCCCEEHHHHCCHHHHHHHHHHHHHCCCCCC
Q ss_conf 3126548984155654211236--66662586013468827999999861688100552498999999999875028860
Q gi|254780634|r 207 TFQRGWFEIQDEGSQIVSNLTA--ITNSSQILDFCAGGGGKTLALSMLLNNKGQIHAWDNNKSRMAPIVARIKRAGIHNV 284 (429)
Q Consensus 207 ~f~~G~~~VQD~aSql~~~~l~--~~~g~~vLD~CAapGGKt~~la~~~~~~g~i~A~D~~~~Rl~~l~~~~~r~g~~~v 284 (429)
T Consensus 140 AFGTG~----H~TT~lcl~~l~~~~~~~~~vLDvG~GSGILa--IaA~klGa~~v~a~DiD~~Av~~a~eN~~lN~v~~~ 213 (298)
T PRK00517 140 AFGTGT----HPTTRLCLEWLEKLVLPGKTVLDVGCGSGILA--IAAAKLGAKPVLAIDIDPQAVEAARENAELNGVDDR 213 (298)
T ss_pred CCCCCC----CHHHHHHHHHHHHHCCCCCEEEEECCCCHHHH--HHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCC
T ss_conf 456777----74799999999843546886887157706999--999974998499998989999999999998699842
Q ss_pred E-EEECCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCH
Q ss_conf 8-821554344572324678962754450444442236672496789999998789999999960898389997758882
Q gi|254780634|r 285 Q-LHSSWESLRNLQEHFTTVLVDAPCSGTGTWRRRPDIKWRLSQKNLIERTEEQKKILEESAQFVRPEGYLVYITCSILP 363 (429)
Q Consensus 285 ~-~~~~~~~~~~~~~~fd~vl~DaPCSg~G~~rr~Pe~~w~~~~~~~~~~~~lQ~~iL~~a~~~lk~gG~lvYsTCS~~~ 363 (429)
T Consensus 214 ~~~~~~~--~~~~~~~~DlvvAN--------I-----------------la~vl~~l~~~~~~~l~~~G~lilSG--Il~ 264 (298)
T PRK00517 214 LELYLPE--DQPLEGKADVIVAN--------I-----------------LANPLIELAPDLAALVKPGGRLILSG--ILA 264 (298)
T ss_pred EEEECCC--CCCCCCCCCEEEEE--------C-----------------CHHHHHHHHHHHHHHHCCCCEEEEEC--CCH
T ss_conf 6896166--43446764689973--------1-----------------58999999999999738997999927--848
Q ss_pred HHCHHHHHHHHHHCCCCEEEECC
Q ss_conf 42999899999857997994143
Q gi|254780634|r 364 EENIQQINYFLSKNPHFSIDSII 386 (429)
Q Consensus 364 ~Ene~vv~~fL~~~~~~~~~~~~ 386 (429)
T Consensus 265 ~~~~~v~~~~-~~~-g~~~~~~~ 285 (298)
T PRK00517 265 EQADEVLEAY-EDA-GFTLDEVA 285 (298)
T ss_pred HHHHHHHHHH-HHC-CCEEEEEE
T ss_conf 8999999999-987-99897886