HHsearch alignment for GI: 254780634 and conserved domain: PRK00811

>PRK00811 spermidine synthase; Provisional.
Probab=93.09  E-value=0.75  Score=25.53  Aligned_cols=123  Identities=17%  Similarity=0.221  Sum_probs=77.2

Q ss_pred             CCCCEEEECCCCCCHHHHHHHHHHCCC--CEEHHHHCCHHHHHHHHHHHHHC--CC-C--CCEEEECC--CCCCCCCCCC
Q ss_conf             666258601346882799999986168--81005524989999999998750--28-8--60882155--4344572324
Q gi|254780634|r  230 TNSSQILDFCAGGGGKTLALSMLLNNK--GQIHAWDNNKSRMAPIVARIKRA--GI-H--NVQLHSSW--ESLRNLQEHF  300 (429)
Q Consensus       230 ~~g~~vLD~CAapGGKt~~la~~~~~~--g~i~A~D~~~~Rl~~l~~~~~r~--g~-~--~v~~~~~~--~~~~~~~~~f  300 (429)
T Consensus        77 ~~pk~VLIiGGGDGg~~r---E~lkh~~v~~v~~VeiD~~Vi~~~~~~lp~~~~~~~~dprv~~~~~Dg~~fv~~~~~~y  153 (283)
T PRK00811         77 PNPKKVLIIGGGDGGTLR---EVLKHPSVEKITMVEIDERVVEMSRKYLPEISGGAWDDPRVELVIGDGVKFVRETENSF  153 (283)
T ss_pred             CCCCEEEEECCCCHHHHH---HHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCCC
T ss_conf             997748995687479999---98427885679999468999999999838863133029715998278999998452355


Q ss_pred             CEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHCHHHHHHHHH
Q ss_conf             678962754450444442236672496789999998789999999960898389997758882429998999998
Q gi|254780634|r  301 TTVLVDAPCSGTGTWRRRPDIKWRLSQKNLIERTEEQKKILEESAQFVRPEGYLVYITCSILPEENIQQINYFLS  375 (429)
Q Consensus       301 d~vl~DaPCSg~G~~rr~Pe~~w~~~~~~~~~~~~lQ~~iL~~a~~~lk~gG~lvYsTCS~~~~Ene~vv~~fL~  375 (429)
T Consensus       154 DvII~D~tD---------P~-----gpa~--~L--ft~~Fy~~~~~~L~~~Gi~v~Q~~sp~~--~~~~~~~~~~  208 (283)
T PRK00811        154 DVIIVDSTD---------PV-----GPAE--GL--FTKEFYENCKRALKEGGIFVAQSESPFL--QADEIKDLHK  208 (283)
T ss_pred             CEEEEECCC---------CC-----CHHH--HH--CCHHHHHHHHHHCCCCCEEEECCCCHHH--CHHHHHHHHH
T ss_conf             489980899---------88-----6445--53--4599999999853999589992798320--6999999999