HHsearch alignment for GI: 254780634 and conserved domain: PRK03612
>PRK03612 spermidine synthase; Provisional.
Probab=92.85 E-value=0.36 Score=27.65 Aligned_cols=128 Identities=20% Similarity=0.222 Sum_probs=76.1
Q ss_pred CCCCCCEEEECCCCCCHHHHHHHHHHCCC--CEEHHHHCCHHHHHHHHHH--HHHCCC-----CCCEEEECCC--CCCCC
Q ss_conf 66666258601346882799999986168--8100552498999999999--875028-----8608821554--34457
Q gi|254780634|r 228 AITNSSQILDFCAGGGGKTLALSMLLNNK--GQIHAWDNNKSRMAPIVAR--IKRAGI-----HNVQLHSSWE--SLRNL 296 (429)
Q Consensus 228 ~~~~g~~vLD~CAapGGKt~~la~~~~~~--g~i~A~D~~~~Rl~~l~~~--~~r~g~-----~~v~~~~~~~--~~~~~ 296 (429)
T Consensus 290 ~~~~p~~VLiiGGGdG~a~rev---Lk~~~ve~v~lVelD~~vv~lar~~~~l~~~n~~a~~DpRv~v~~~Da~~~l~~~ 366 (516)
T PRK03612 290 ASPRARRVLILGGGDGLALREV---LKYPDVEQVTLVDLDPAVTELARTSPALRALNGGALDDPRVTVVNDDAFNWLRKL 366 (516)
T ss_pred CCCCCCEEEEECCCCCHHHHHH---HCCCCCCEEEEEECCHHHHHHHHHCCCHHHHHCCCCCCCCEEEEEHHHHHHHHHC
T ss_conf 6999773899837760879998---6489966378995188999999857214444123234996489853789999868
Q ss_pred CCCCCEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC-HHHCHHHHHHHHH
Q ss_conf 232467896275445044444223667249678999999878999999996089838999775888-2429998999998
Q gi|254780634|r 297 QEHFTTVLVDAPCSGTGTWRRRPDIKWRLSQKNLIERTEEQKKILEESAQFVRPEGYLVYITCSIL-PEENIQQINYFLS 375 (429)
Q Consensus 297 ~~~fd~vl~DaPCSg~G~~rr~Pe~~w~~~~~~~~~~~~lQ~~iL~~a~~~lk~gG~lvYsTCS~~-~~Ene~vv~~fL~ 375 (429)
T Consensus 367 ~~~yDvIi~D~pdP~~------~~~-~~LYs~----------eFY~~~~~~L~~~G~~v~qs~Sp~~~~~~f~~i~~T~~ 429 (516)
T PRK03612 367 PETFDAIIVDLPDPSN------PAL-GKLYSV----------EFYRLLKRRLAPDGLLVVQSTSPYFAPKAFWSIEATLE 429 (516)
T ss_pred CCCCCEEEEECCCCCC------CCC-CCCCCH----------HHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHH
T ss_conf 8878889981899799------522-467539----------99999998449995899936897552203468999999