HHsearch alignment for GI: 254780634 and conserved domain: PTZ00146

>PTZ00146 fibrillarin; Provisional.
Probab=97.82  E-value=0.00062  Score=46.48  Aligned_cols=131  Identities=17%  Similarity=0.176  Sum_probs=89.9

Q ss_pred             CCCCCCCEEEECCCCCCHHHHHHHHHHCCCCEEHHHHCCHHHHHHHHHHHHHCCCCCCE-EEECCCCCC----CCCCCCC
Q ss_conf             36666625860134688279999998616881005524989999999998750288608-821554344----5723246
Q gi|254780634|r  227 TAITNSSQILDFCAGGGGKTLALSMLLNNKGQIHAWDNNKSRMAPIVARIKRAGIHNVQ-LHSSWESLR----NLQEHFT  301 (429)
Q Consensus       227 l~~~~g~~vLD~CAapGGKt~~la~~~~~~g~i~A~D~~~~Rl~~l~~~~~r~g~~~v~-~~~~~~~~~----~~~~~fd  301 (429)
T Consensus       131 i~Ik~GskVLYLGAasGTTVSHVSDIVG~~G~VYAVEfSpr~~RdLl~lA~~R--~NIvPIle-DAr~P~kYr~lV~~VD  207 (296)
T PTZ00146        131 IPIKPGSKVLYLGAASGTTVSHVSDLVGPEGVVYAVEFSHRSGRDLVEMAKRR--TNIVPIIE-DARYPQKYRMLVPMVD  207 (296)
T ss_pred             CCCCCCCEEEEECCCCCCCHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHCC--CCCEEEEC-CCCCHHHHHHHCCCCC
T ss_conf             44379998998514679865566650178861999970646688999997227--98335777-7897467554245555


Q ss_pred             EEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH-HHHHHHHCCCCEEEEE---ECCCCHHHCHHHHHHHHHHC
Q ss_conf             7896275445044444223667249678999999878999-9999960898389997---75888242999899999857
Q gi|254780634|r  302 TVLVDAPCSGTGTWRRRPDIKWRLSQKNLIERTEEQKKIL-EESAQFVRPEGYLVYI---TCSILPEENIQQINYFLSKN  377 (429)
Q Consensus       302 ~vl~DaPCSg~G~~rr~Pe~~w~~~~~~~~~~~~lQ~~iL-~~a~~~lk~gG~lvYs---TCS~~~~Ene~vv~~fL~~~  377 (429)
T Consensus       208 vIf~DVAQp-------------------------dQarI~~~Na~~FLK~gG~~~i~IKArsIDst~~p~~VF~~Ev~kL  262 (296)
T PTZ00146        208 CIFADVAQP-------------------------DQARIVALNAQHFLKNGGHFVISIKANCIDSTADPEVVFASEVQKL  262 (296)
T ss_pred             EEEECCCCH-------------------------HHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHH
T ss_conf             899617876-------------------------5899999999985316988999997266325679899999999999


Q ss_pred             --CCCEEEEC
Q ss_conf             --99799414
Q gi|254780634|r  378 --PHFSIDSI  385 (429)
Q Consensus       378 --~~~~~~~~  385 (429)
T Consensus       263 ~~~~f~~~e~  272 (296)
T PTZ00146        263 KKEGLKPKEQ  272 (296)
T ss_pred             HHCCCCEEEE
T ss_conf             8728963688