HHsearch alignment for GI: 254780634 and conserved domain: TIGR00308
>TIGR00308 TRM1 N2,N2-dimethylguanosine tRNA methyltransferase; InterPro: IPR002905 This enzyme 2.1.1.32 from EC uses S-adenosyl-L-methionine to methylate tRNA: S-AdoMet + tRNA = S-adenosyl-L-homocysteine + tRNA containing N2-methylguanine The TRM1 gene of Saccharomyces cerevisiae is necessary for the N2,N2-dimethylguanosine modification of both mitochondrial and cytoplasmic tRNAs . The enzyme is found in both eukaryotes and archaea .; GO: 0003723 RNA binding, 0004809 tRNA (guanine-N2-)-methyltransferase activity, 0008033 tRNA processing.
Probab=92.40 E-value=0.062 Score=32.87 Aligned_cols=80 Identities=14% Similarity=0.176 Sum_probs=63.8
Q ss_pred CCCCCCEEEECCCCCCHHHHHHHHHHC--CCCEEHHHHCCHHHHHHHHHHHHHCCCCCCEEEECCCCCC-C-----CCCC
Q ss_conf 666662586013468827999999861--6881005524989999999998750288608821554344-5-----7232
Q gi|254780634|r 228 AITNSSQILDFCAGGGGKTLALSMLLN--NKGQIHAWDNNKSRMAPIVARIKRAGIHNVQLHSSWESLR-N-----LQEH 299 (429)
Q Consensus 228 ~~~~g~~vLD~CAapGGKt~~la~~~~--~~g~i~A~D~~~~Rl~~l~~~~~r~g~~~v~~~~~~~~~~-~-----~~~~ 299 (429)
T Consensus 91 rnePyi~~~dALSasGiRaiRya~E~~fngv~~v~~ND~~P~Ave~I~~N~~~N~v~N~~v~n~Da~~~L~~~nkat~~~ 170 (462)
T TIGR00308 91 RNEPYIEIADALSASGIRAIRYALEVEFNGVKKVFANDINPKAVESIKNNVKLNSVENIEVINEDAAAVLRKRNKATFRK 170 (462)
T ss_pred CCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCHHHCCC
T ss_conf 65437899987510408899998744657610677534773788998841232442276545503799987512112367
Q ss_pred CCEEEECC
Q ss_conf 46789627
Q gi|254780634|r 300 FTTVLVDA 307 (429)
Q Consensus 300 fd~vl~Da 307 (429)
T Consensus 171 F~viDiDP 178 (462)
T TIGR00308 171 FEVIDIDP 178 (462)
T ss_pred CCEEEECC
T ss_conf 64376478