HHsearch alignment for GI: 254780634 and conserved domain: TIGR02081

>TIGR02081 metW methionine biosynthesis protein MetW; InterPro: IPR010743 This family consists of several bacterial and one archaeal methionine biosynthesis MetW proteins. Biosynthesis of methionine from homoserine in Pseudomonas putida takes place in three steps. The first step is the acylation of homoserine to yield an acyl-L-homoserine. This reaction is catalysed by the products of the metXW genes and is equivalent to the first step in enterobacteria, Gram-positive bacteria and fungi, except that in these microorganisms the reaction is catalysed by a single polypeptide (the product of the metA gene in Escherichia coli and the met5 gene product in Neurospora crassa). In Pseudomonas putida, as in Gram-positive bacteria and certain fungi, the second and third steps are a direct sulphydrylation that converts the O-acyl-L-homoserine into homocysteine and further methylation to yield methionine. The latter reaction can be mediated by either of the two methionine synthetases present in the cells . .
Probab=93.43  E-value=0.18  Score=29.67  Aligned_cols=74  Identities=19%  Similarity=0.208  Sum_probs=46.9

Q ss_pred             CCCCCEEEECCCCCCHHHHHHHHHHCCCC------EEHHHHCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCE
Q ss_conf             66662586013468827999999861688------100552498999999999875028860882155434457232467
Q gi|254780634|r  229 ITNSSQILDFCAGGGGKTLALSMLLNNKG------QIHAWDNNKSRMAPIVARIKRAGIHNVQLHSSWESLRNLQEHFTT  302 (429)
Q Consensus       229 ~~~g~~vLD~CAapGGKt~~la~~~~~~g------~i~A~D~~~~Rl~~l~~~~~r~g~~~v~~~~~~~~~~~~~~~fd~  302 (429)
T Consensus        11 Ip~GSRVLDLGCGdG~LL~~L~d~k~v~GPPttehRL~G~Eid~~~v~Ac~~----RGv~VIq~Dld~GL~~F~D~~FD~   86 (205)
T TIGR02081        11 IPPGSRVLDLGCGDGELLALLRDEKQVRGPPTTEHRLYGIEIDQDGVLACVA----RGVSVIQGDLDEGLEAFPDKSFDY   86 (205)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEECHHHHHHHHH----CCCCEECCCCCCCCCCCCCCCCCE
T ss_conf             6888736410168878999999743789888712000102345445999986----252013006003401167887662


Q ss_pred             EEEC
Q ss_conf             8962
Q gi|254780634|r  303 VLVD  306 (429)
Q Consensus       303 vl~D  306 (429)
T Consensus        87 ViLs   90 (205)
T TIGR02081        87 VILS   90 (205)
T ss_pred             EEEC
T ss_conf             5421