HHsearch alignment for GI: 254780634 and conserved domain: TIGR02752
>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase; InterPro: IPR014122 MenG is a generic term for a methyltransferase that catalyses the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species..
Probab=98.00 E-value=4.1e-05 Score=54.48 Aligned_cols=128 Identities=23% Similarity=0.361 Sum_probs=100.5
Q ss_pred CCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCEEHHHHCCHHHHHHHHHHHHHCCCCCCEEEECCC-CCCCCCCCCC
Q ss_conf 211236666625860134688279999998616881005524989999999998750288608821554-3445723246
Q gi|254780634|r 223 VSNLTAITNSSQILDFCAGGGGKTLALSMLLNNKGQIHAWDNNKSRMAPIVARIKRAGIHNVQLHSSWE-SLRNLQEHFT 301 (429)
Q Consensus 223 ~~~~l~~~~g~~vLD~CAapGGKt~~la~~~~~~g~i~A~D~~~~Rl~~l~~~~~r~g~~~v~~~~~~~-~~~~~~~~fd 301 (429)
T Consensus 37 ~m~~m~v~~G~~~ldvCCGt~dW~~~l~~~~G~~G~v~Gldfs~nml~~~~~k~~~~~~~~~~l~hGnam~lP~~~~~fd 116 (231)
T TIGR02752 37 TMKRMNVQKGKKALDVCCGTADWAIALAEAVGKEGEVKGLDFSENMLSVGKQKVKDAKLSNVELVHGNAMELPYDDNSFD 116 (231)
T ss_pred HHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHEEEECCCHHCCCCCCCCCC
T ss_conf 98776564041211210373378889888617777167400358899999988875432002223052001787766612
Q ss_pred EEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHCHHHHHH
Q ss_conf 78962754450444442236672496789999998789999999960898389997758882429998999
Q gi|254780634|r 302 TVLVDAPCSGTGTWRRRPDIKWRLSQKNLIERTEEQKKILEESAQFVRPEGYLVYITCSILPEENIQQINY 372 (429)
Q Consensus 302 ~vl~DaPCSg~G~~rr~Pe~~w~~~~~~~~~~~~lQ~~iL~~a~~~lk~gG~lvYsTCS~~~~Ene~vv~~ 372 (429)
T Consensus 117 yvtiG-----fGl-rnvPd------------y----~~vl~em~rv~kPGG~~~C~~tsqP~~~~~~q~y~ 165 (231)
T TIGR02752 117 YVTIG-----FGL-RNVPD------------Y----MTVLKEMARVVKPGGKVVCLETSQPTLPGFKQLYF 165 (231)
T ss_pred EEEEC-----CCC-CCHHH------------H----HHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHH
T ss_conf 57752-----551-23026------------9----99999988862799717986257762579999999