HHsearch alignment for GI: 254780634 and conserved domain: pfam05219
>pfam05219 DREV DREV methyltransferase. This family contains DREV protein homologues from several eukaryotes. The function of this protein is unknown. However, these proteins appear to be related to other methyltransferases (Bateman A pers obs).
Probab=97.15 E-value=0.0026 Score=42.23 Aligned_cols=178 Identities=16% Similarity=0.213 Sum_probs=96.9
Q ss_pred HCCCHHHHHHHHHHCCH-HHHHHHHHHCCCCC-CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 08998899999985744-89999998628986-11124778899899999898718875454754311345665444610
Q gi|254780634|r 124 GNIPQWLQSSFQSYFKD-TWLKEAKSLSMRAP-LDLRTNTLKVNRCKLFKNLCHYGVHHSSISRFGLRIPATKGKSRLPN 201 (429)
Q Consensus 124 ~s~P~WL~~~~~~~~ge-~~~~~l~a~~~~~p-l~iRvN~~k~~~~~~~~~L~~~gi~~~~~~~~~~~l~~~~~~~~~~~ 201 (429)
T Consensus 6 ~~L~~~l~skFv~l~~D~eT~~FL~~s~~~S~~~~~q~--~h---sl~~~~L~~f-ms~Tdi--NG~-L----gRGsM-f 71 (265)
T pfam05219 6 HELPPRFQSKFVPSEPDATTQSFLENSKALSANIFTQL--WH---ALARSILSFF-MSQTDI--NGF-L----GRGSM-F 71 (265)
T ss_pred CCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHH--HH---HHHHHHHHHH-HHHHHH--HHH-H----CCCCE-E
T ss_conf 54898899766622878889999996243126799999--99---9999999989-624216--656-4----57765-8
Q ss_pred HHCCHHHCCCEEEEECCCCCCCCCCC---CCCCCCEEEECCCCCCHHHHHHHHHHCCCCEEHHHHCCHHHHHHHHHHHHH
Q ss_conf 11096312654898415565421123---666662586013468827999999861688100552498999999999875
Q gi|254780634|r 202 VMNDITFQRGWFEIQDEGSQIVSNLT---AITNSSQILDFCAGGGGKTLALSMLLNNKGQIHAWDNNKSRMAPIVARIKR 278 (429)
Q Consensus 202 ~~~~~~f~~G~~~VQD~aSql~~~~l---~~~~g~~vLD~CAapGGKt~~la~~~~~~g~i~A~D~~~~Rl~~l~~~~~r 278 (429)
T Consensus 72 V~S~~Q~~~----------LL~~~~~~~~~~~~~~~LLDlGAGdG~VT~~la~~F~---~V~aTE~S~~----Mr~rL~~ 134 (265)
T pfam05219 72 IFSEEQFRK----------LLVIGGFQPASGQEPVTLLDLGAGDGEITLRMAPTFE---EVYATELSWT----MRDRLKK 134 (265)
T ss_pred EECHHHHHH----------HHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHC---EEEEEECCHH----HHHHHHH
T ss_conf 844999999----------9724376788887766478835899789999997523---5888727899----9999997
Q ss_pred CCCCCCEEEECCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
Q ss_conf 02886088215543445723246789627544504444422366724967899999987899999999608983899977
Q gi|254780634|r 279 AGIHNVQLHSSWESLRNLQEHFTTVLVDAPCSGTGTWRRRPDIKWRLSQKNLIERTEEQKKILEESAQFVRPEGYLVYIT 358 (429)
Q Consensus 279 ~g~~~v~~~~~~~~~~~~~~~fd~vl~DaPCSg~G~~rr~Pe~~w~~~~~~~~~~~~lQ~~iL~~a~~~lk~gG~lvYsT 358 (429)
T Consensus 135 rgf~vl~~~~~----~~~~~~fDvIsc------LNvLDRc~----------------~P~~LL~~i~~~L~P~G~lilAv 188 (265)
T pfam05219 135 KNYNVLTEIEW----QETDVNLDLILC------LNLLDRCF----------------DPFKLLEDIHLALAPNGRVIVAL 188 (265)
T ss_pred CCCEEEEEHHC----CCCCCCEEEEHH------HHHHHCCC----------------CHHHHHHHHHHHCCCCCEEEEEE
T ss_conf 59868750120----356874455422------24453138----------------86999999997249996799999