HHsearch alignment for GI: 254780635 and conserved domain: COG3487

>COG3487 IrpA Uncharacterized iron-regulated protein [Inorganic ion transport and metabolism].
Probab=100.00  E-value=0  Score=675.37  Aligned_cols=384  Identities=51%  Similarity=0.858  Sum_probs=376.0

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC
Q ss_conf             67889999887886798899999999999999999994999889999999999999977765654015402210001100
Q gi|254780635|r   23 NVSLEKVLQNYATIAHAKYEDALMCARTLDSAIETLVTTPNKKNLENARLQWIRARIPYQQSEVYRFGNKIVDTWDKKVN  102 (412)
Q Consensus        23 ~~~~~~vl~~yadiv~~~Y~d~~~~a~~L~~ai~af~a~Pt~~~L~aak~aw~~Ar~~we~~E~f~fGpa~~~~~~~~in  102 (412)
T Consensus        48 atdaaaVikhYadiA~AkyeDsl~TA~aL~KaiDalla~PsaetLkaareAW~aARvPYqqsEvyRFGN~ivDdWEGqvN  127 (446)
T COG3487          48 ATDAAAVIKHYADIAHAKYEDSLTTAQALQKAIDALLAKPSAETLKAAREAWLAARVPYQQSEVYRFGNAIVDDWEGQVN  127 (446)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHCCCCC
T ss_conf             23489999989988888888777789999999999971986889999999999853851265677606710343136435


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHCCCCCCHHHCCHHHHHHHHCCC
Q ss_conf             16576210001123334443333322233336433435522222320397888766641666510211278999986277
Q gi|254780635|r  103 AWPLDEGFIDYVDSSYGKENEENNLYTANIIANSKIIVNEKEIDLSIISPDLLRKLHRANGIDTNITTGYHVIEFLLWGQ  182 (412)
Q Consensus       103 ~WPl~~~~iD~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~d~~~it~~~l~~~~e~~~~~~~~~~GfhAiEyLLfg~  182 (412)
T Consensus       128 aWPLDEGLIDYVa~sY~~e~~~N~~~tANiiAN~~i~i~g~kvDa~~itpEll~sL~eaGg~EANVatGYHAIEFLLWGQ  207 (446)
T COG3487         128 AWPLDEGLIDYVAKSYGHESDENELATANIIANTEIKIGGTKVDAKEITPELLASLNEAGGSEANVATGYHAIEFLLWGQ  207 (446)
T ss_pred             CCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCEEEECCEECCHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCC
T ss_conf             67365207998775304445777652012220552655773412754599999888861584102000166887875235


Q ss_pred             CCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH-HHHCCHHHHHHHHHHHHHH
Q ss_conf             877765555553034320113345404567999999999999999999952035541057-7621534459999999999
Q gi|254780635|r  183 DLKTNVREPGNRPYTDFDIGNCTGGHCRRRVEYLKVVSKILVSDLEEMMKAWGPDGQATK-DLMKDINAGLNSIITGMTS  261 (412)
Q Consensus       183 ~~~~~~~~~~~r~~~d~~~~~~t~~~~~rr~~YL~ava~~l~~~~~~l~~~W~~~~~~~~-~~~~~~~~~~~~i~~g~~~  261 (412)
T Consensus       208 DLnGTgpGAGnRpyTDyd~k~CTngnCDRRA~YLKaat~LLVsDLe~Mv~~W~~~~~~rk~lv~~~~~~gl~~il~GMGS  287 (446)
T COG3487         208 DLNGTGPGAGNRPYTDYDQKACTNGNCDRRAAYLKAATSLLVSDLEEMVKQWKEDGNARKQLVEEDPKTGLRKILTGMGS  287 (446)
T ss_pred             CCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHCCCC
T ss_conf             45799999888985355676354898347899999999999988999997327264487876516800128999844663


Q ss_pred             HHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHH
Q ss_conf             98987643002242357884344666352728999999999999950333566654335646899997518878999999
Q gi|254780635|r  262 LSYNELAGERMNLGLILHDPEQEIDCFSDNTYASYLNDVIGIISSYTGEYIRMNGEKIHGASIHDLISHNNRNLAQEIND  341 (412)
Q Consensus       262 ~~~~Ev~~~Ki~~pl~~~~pe~~Es~~S~~S~~d~~~Ni~gi~n~y~G~~~~~~g~~~~g~sl~d~l~~~~~~La~~i~~  341 (412)
T Consensus       288 LS~GELAGERMKlgL~lhdpEeEhDCFSDnThnshl~da~gI~~aY~g~YtR~DGs~~~GpSl~~lVaakDaa~~kel~~  367 (446)
T COG3487         288 LSYGELAGERMKLGLELHDPEEEHDCFSDNTHNSHLYDAIGIRNAYLGSYTRVDGSVVKGPSLADLVAAKDAAANKELKA  367 (446)
T ss_pred             CCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHCCHHHHHHHHCCCEEEECCCEECCCCHHHHHHHHHHHHHHHHHH
T ss_conf             21575541678865543781454112357760234301143677750440430375404847999987412324289998


Q ss_pred             HHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf             99999999983111131145345754049989999999999999999999999987528766320
Q gi|254780635|r  342 KFSNTMKDFHILKDRAENIESFDQMISENNPEGNKIVRNLINDLITQTESLRKIRIALDLIEPNR  406 (412)
Q Consensus       342 ~f~~a~~~l~ai~~~~~~~~~~D~~i~~~~~~~~~~v~~ai~aL~~~~~~i~~~~~~Lgl~~~~~  406 (412)
T Consensus       368 ~l~~t~~km~a~~~rAe~geayDQmIae~N~~Gna~vqaAIdaLi~Qt~siEra~g~l~l~~l~~  432 (446)
T COG3487         368 KLAATVAKMQAIVKRAEKGEAYDQMIAEGNAAGNATVQAAIDALIAQTKSIERAAGALGLGNLEP  432 (446)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf             99999999999999887233688876377631048999999999986304999987537665476