HHsearch alignment for GI: 254780635 and conserved domain: COG3487
>COG3487 IrpA Uncharacterized iron-regulated protein [Inorganic ion transport and metabolism].
Probab=100.00 E-value=0 Score=675.37 Aligned_cols=384 Identities=51% Similarity=0.858 Sum_probs=376.0
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC
Q ss_conf 67889999887886798899999999999999999994999889999999999999977765654015402210001100
Q gi|254780635|r 23 NVSLEKVLQNYATIAHAKYEDALMCARTLDSAIETLVTTPNKKNLENARLQWIRARIPYQQSEVYRFGNKIVDTWDKKVN 102 (412)
Q Consensus 23 ~~~~~~vl~~yadiv~~~Y~d~~~~a~~L~~ai~af~a~Pt~~~L~aak~aw~~Ar~~we~~E~f~fGpa~~~~~~~~in 102 (412)
T Consensus 48 atdaaaVikhYadiA~AkyeDsl~TA~aL~KaiDalla~PsaetLkaareAW~aARvPYqqsEvyRFGN~ivDdWEGqvN 127 (446)
T COG3487 48 ATDAAAVIKHYADIAHAKYEDSLTTAQALQKAIDALLAKPSAETLKAAREAWLAARVPYQQSEVYRFGNAIVDDWEGQVN 127 (446)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHCCCCC
T ss_conf 23489999989988888888777789999999999971986889999999999853851265677606710343136435
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHCCCCCCHHHCCHHHHHHHHCCC
Q ss_conf 16576210001123334443333322233336433435522222320397888766641666510211278999986277
Q gi|254780635|r 103 AWPLDEGFIDYVDSSYGKENEENNLYTANIIANSKIIVNEKEIDLSIISPDLLRKLHRANGIDTNITTGYHVIEFLLWGQ 182 (412)
Q Consensus 103 ~WPl~~~~iD~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~d~~~it~~~l~~~~e~~~~~~~~~~GfhAiEyLLfg~ 182 (412)
T Consensus 128 aWPLDEGLIDYVa~sY~~e~~~N~~~tANiiAN~~i~i~g~kvDa~~itpEll~sL~eaGg~EANVatGYHAIEFLLWGQ 207 (446)
T COG3487 128 AWPLDEGLIDYVAKSYGHESDENELATANIIANTEIKIGGTKVDAKEITPELLASLNEAGGSEANVATGYHAIEFLLWGQ 207 (446)
T ss_pred CCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCEEEECCEECCHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCC
T ss_conf 67365207998775304445777652012220552655773412754599999888861584102000166887875235
Q ss_pred CCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH-HHHCCHHHHHHHHHHHHHH
Q ss_conf 877765555553034320113345404567999999999999999999952035541057-7621534459999999999
Q gi|254780635|r 183 DLKTNVREPGNRPYTDFDIGNCTGGHCRRRVEYLKVVSKILVSDLEEMMKAWGPDGQATK-DLMKDINAGLNSIITGMTS 261 (412)
Q Consensus 183 ~~~~~~~~~~~r~~~d~~~~~~t~~~~~rr~~YL~ava~~l~~~~~~l~~~W~~~~~~~~-~~~~~~~~~~~~i~~g~~~ 261 (412)
T Consensus 208 DLnGTgpGAGnRpyTDyd~k~CTngnCDRRA~YLKaat~LLVsDLe~Mv~~W~~~~~~rk~lv~~~~~~gl~~il~GMGS 287 (446)
T COG3487 208 DLNGTGPGAGNRPYTDYDQKACTNGNCDRRAAYLKAATSLLVSDLEEMVKQWKEDGNARKQLVEEDPKTGLRKILTGMGS 287 (446)
T ss_pred CCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHCCCC
T ss_conf 45799999888985355676354898347899999999999988999997327264487876516800128999844663
Q ss_pred HHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHH
Q ss_conf 98987643002242357884344666352728999999999999950333566654335646899997518878999999
Q gi|254780635|r 262 LSYNELAGERMNLGLILHDPEQEIDCFSDNTYASYLNDVIGIISSYTGEYIRMNGEKIHGASIHDLISHNNRNLAQEIND 341 (412)
Q Consensus 262 ~~~~Ev~~~Ki~~pl~~~~pe~~Es~~S~~S~~d~~~Ni~gi~n~y~G~~~~~~g~~~~g~sl~d~l~~~~~~La~~i~~ 341 (412)
T Consensus 288 LS~GELAGERMKlgL~lhdpEeEhDCFSDnThnshl~da~gI~~aY~g~YtR~DGs~~~GpSl~~lVaakDaa~~kel~~ 367 (446)
T COG3487 288 LSYGELAGERMKLGLELHDPEEEHDCFSDNTHNSHLYDAIGIRNAYLGSYTRVDGSVVKGPSLADLVAAKDAAANKELKA 367 (446)
T ss_pred CCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHCCHHHHHHHHCCCEEEECCCEECCCCHHHHHHHHHHHHHHHHHH
T ss_conf 21575541678865543781454112357760234301143677750440430375404847999987412324289998
Q ss_pred HHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 99999999983111131145345754049989999999999999999999999987528766320
Q gi|254780635|r 342 KFSNTMKDFHILKDRAENIESFDQMISENNPEGNKIVRNLINDLITQTESLRKIRIALDLIEPNR 406 (412)
Q Consensus 342 ~f~~a~~~l~ai~~~~~~~~~~D~~i~~~~~~~~~~v~~ai~aL~~~~~~i~~~~~~Lgl~~~~~ 406 (412)
T Consensus 368 ~l~~t~~km~a~~~rAe~geayDQmIae~N~~Gna~vqaAIdaLi~Qt~siEra~g~l~l~~l~~ 432 (446)
T COG3487 368 KLAATVAKMQAIVKRAEKGEAYDQMIAEGNAAGNATVQAAIDALIAQTKSIERAAGALGLGNLEP 432 (446)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 99999999999999887233688876377631048999999999986304999987537665476