HHsearch alignment for GI: 254780636 and conserved domain: PRK07246
>PRK07246 bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon; Validated.
Probab=99.13 E-value=2.5e-09 Score=73.47 Aligned_cols=136 Identities=19% Similarity=0.223 Sum_probs=89.2
Q ss_pred CCCCEEEECCCCCCCCCCCEEEEEEEEE---CCCCE---EEECCCCCCCC------------------------CHHHHH
Q ss_conf 8982799717778985445079999841---89428---99746577857------------------------067767
Q gi|254780636|r 19 YVDAIAVDTETLGLMPRRDRLCIVQLSP---GDGTV---DIIRIAAGQKN------------------------APNLVG 68 (207)
Q Consensus 19 ~~~~iaiDtEt~~l~~~~~~l~LiQl~~---~~~~~---~l~~~~~~~~~------------------------~~~L~~ 68 (207)
T Consensus 6 ~~~~~vvDlETTG~~~~-~--~Iiqi~~v~~~~~~i~~~f~t~vnP~~~ip~~I~~LTgI~~~~v~~ap~f~~v~~~~~~ 82 (820)
T PRK07246 6 LRKYAVVDLEATGAGPN-A--SIIQVGIVIIQGNKIIDSYETDVNPHESLDEHIVHLTGITDKQLAQAPDFSQVAHHIYQ 82 (820)
T ss_pred CCCEEEEEEECCCCCCC-C--CEEEEEEEEEECCEEEEEEEECCCCCCCCCHHHHHHCCCCHHHHHCCCCHHHHHHHHHH
T ss_conf 67189999887898999-8--77999999999999989987311889979978886469898998529998999999999
Q ss_pred HHHCCCCCEEECCCCHHHHHHHHHH---HCCC-CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEECCCCCCC
Q ss_conf 7732364023010000168886542---0000-00045789886521100000088777654200246752003656544
Q gi|254780636|r 69 MLVDEKREKIFHYGRFDIAVLFYTF---GVRV-RPVFCTKIASRLTRTYTNQHGLKDNLKELLGINISKAQQSSDWSADD 144 (207)
Q Consensus 69 ll~d~~i~KV~Hn~~~D~~~L~~~~---gi~~-~~i~DT~ias~l~~~~~~~~~L~~L~~~~lg~~ldK~~q~SdW~~rp 144 (207)
T Consensus 83 ~l~~~--~~VaHNv~FD~~fl~~~~~~~g~~~~~~~~DTv~La~i~~P~~~~y~L~~L~~~-l~~~~~~~H--------- 150 (820)
T PRK07246 83 LIEDC--IFVAHNVKFDANLLAEALFLEGYELRTPRVDTVELAQVFFPRLEKYSLSHLSRQ-LNIDLAEAH--------- 150 (820)
T ss_pred HHCCC--EEEEECCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHH-CCCCCCCCC---------
T ss_conf 96798--599837201699999999975898899826099999997798788888999997-399999887---------
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 32368999986459999999999999997491
Q gi|254780636|r 145 LSDEQLQYAASDVVHLHALRLQFTEKLQRLGR 176 (207)
Q Consensus 145 Ls~~Qi~YAA~Dv~~l~~L~~~l~~~L~~~~~ 176 (207)
T Consensus 151 -------rA~~Da~ata~l~~~l~~~l~~lp~ 175 (820)
T PRK07246 151 -------TAIADARATAILFLRLLQKIESLPK 175 (820)
T ss_pred -------CHHHHHHHHHHHHHHHHHHHHCCCH
T ss_conf -------6188999999999999999861999