HHsearch alignment for GI: 254780636 and conserved domain: PRK08434

Probab=99.96  E-value=1.8e-28  Score=184.76  Aligned_cols=187  Identities=21%  Similarity=0.259  Sum_probs=147.8

Q ss_pred             CCHHH-HCCCCCCEEEECCCCCCCCCCCEEEEEEEEECCCCEEEECCCCCCCCC----------HHHHHHHHCCCCCEEE
Q ss_conf             88578-424898279971777898544507999984189428997465778570----------6776777323640230
Q gi|254780636|r   11 IPAEC-AARYVDAIAVDTETLGLMPRRDRLCIVQLSPGDGTVDIIRIAAGQKNA----------PNLVGMLVDEKREKIF   79 (207)
Q Consensus        11 l~~~~-~l~~~~~iaiDtEt~~l~~~~~~l~LiQl~~~~~~~~l~~~~~~~~~~----------~~L~~ll~d~~i~KV~   79 (207)
T Consensus       308 l~~~l~~l~~~~~~a~d~Ett~ld~~~a~lvGis~~~~~~~a~YiPi~h~~l~~~~~~~~~~~~~~l~~~~~~---~~Ig  384 (887)
T PRK08434        308 LEEILNTLPKESIIAFDTETTGLDTKEAKLVGFSFCFNEEEAYYVPLAHSYLGVGEQISLESAKKAIEKIFNH---FVIG  384 (887)
T ss_pred             HHHHHHHCCCCCEEEEEEECCCCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCHHHCCHHHHHHHHHHHHHC---CCHH
T ss_conf             9999985311676999951278661334305899995598589997521125773335999999997876337---4036


Q ss_pred             CCCCHHHHHHHHHHHCCCCC-HHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCC----EECCCCCCCCCHHHHHHHH
Q ss_conf             10000168886542000000-045789886521100000088777654200246752----0036565443236899998
Q gi|254780636|r   80 HYGRFDIAVLFYTFGVRVRP-VFCTKIASRLTRTYTNQHGLKDNLKELLGINISKAQ----QSSDWSADDLSDEQLQYAA  154 (207)
Q Consensus        80 Hn~~~D~~~L~~~~gi~~~~-i~DT~ias~l~~~~~~~~~L~~L~~~~lg~~ldK~~----q~SdW~~rpLs~~Qi~YAA  154 (207)
T Consensus       385 hNlKyDl~vL~~~~gi~l~g~~fDTmLAaYLLdp~-~r~~Ld~La~~yL~~~~i~~e~l~~kg~~f~~v~i-~~a~~YAa  462 (887)
T PRK08434        385 HNLKYDFKIIQNNFGLELPQKYADTMILAWLKDPS-SRVGLDDLAKRLFNYEMIHFESVVKKGENFSSVDL-EKACKYAA  462 (887)
T ss_pred             HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCC-CCCCHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCH-HHHHHHHH
T ss_conf             47799999999856987777314899999866986-66666789999708787748998546777020788-99999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCH---HHHH-HHHHHHHHHHHHHHCCCCCCCC
Q ss_conf             64599999999999999974918---9999-9996400689998667988884
Q gi|254780636|r  155 SDVVHLHALRLQFTEKLQRLGRS---DLAT-SCCNFLMDRAELDLLGWENVDI  203 (207)
Q Consensus       155 ~Dv~~l~~L~~~l~~~L~~~~~~---~~~~-~e~~~l~~~~~me~~g~~~~~~  203 (207)
T Consensus       463 edA~it~~L~~~l~~~L~~~~~~~L~~Ly~~IElPLi~VLa~ME~~GI~-VD~  514 (887)
T PRK08434        463 EDAWITLRFYKKFLENLEKRGATHLLELAKNVEFPFIKTLLMMEENGIK-LDT  514 (887)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCH
T ss_conf             9999999999999999986551779999999886599999999971950-269