HHsearch alignment for GI: 254780636 and conserved domain: PRK08517

>PRK08517 DNA polymerase III subunit epsilon; Provisional.
Probab=99.14  E-value=6.7e-10  Score=76.81  Aligned_cols=135  Identities=19%  Similarity=0.193  Sum_probs=88.0

Q ss_pred             CCCCCCEEEECCCCCCCCCCCEEEEEEEEE---CCCCE-----EEECCCCCC--------------CCC-------HHHH
Q ss_conf             248982799717778985445079999841---89428-----997465778--------------570-------6776
Q gi|254780636|r   17 ARYVDAIAVDTETLGLMPRRDRLCIVQLSP---GDGTV-----DIIRIAAGQ--------------KNA-------PNLV   67 (207)
Q Consensus        17 l~~~~~iaiDtEt~~l~~~~~~l~LiQl~~---~~~~~-----~l~~~~~~~--------------~~~-------~~L~   67 (207)
T Consensus        67 ~ke~~fvvvDlETTGl~~~~d~I--IEIgavkv~~g~iid~f~tlVnp~~Ip~~It~lTGIt~emv~~aP~~~evl~~f~  144 (259)
T PRK08517         67 IKEQVFCFVDIETNGSKPKKGQI--IEIGAVKVKGGEIIDRFESFVKAKEVPEYITELTGITYEDLENAPSLKEVLEDFR  144 (259)
T ss_pred             CCCCCEEEEEEECCCCCCCCCEE--EEEEEEEEECCEEEEEEEEEECCCCCCHHHHHHCCCCHHHHHCCCCHHHHHHHHH
T ss_conf             67883899996589989999824--9999999999999998743239898998882213899899827998899999999


Q ss_pred             HHHHCCCCCEEECCCCHHHHHHHHHHH---CC-C-CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEECCCCC
Q ss_conf             777323640230100001688865420---00-0-000457898865211000000887776542002467520036565
Q gi|254780636|r   68 GMLVDEKREKIFHYGRFDIAVLFYTFG---VR-V-RPVFCTKIASRLTRTYTNQHGLKDNLKELLGINISKAQQSSDWSA  142 (207)
Q Consensus        68 ~ll~d~~i~KV~Hn~~~D~~~L~~~~g---i~-~-~~i~DT~ias~l~~~~~~~~~L~~L~~~~lg~~ldK~~q~SdW~~  142 (207)
T Consensus       145 ~Fi~d~--ilVaHNa~FD~~FL~~~l~r~g~~~l~n~~lDTl~LAR~~~p~-~~ykL~~La~~-~~I~~~~~--------  212 (259)
T PRK08517        145 LFLGDS--VFVAHNVNFDYNFISRSLEEIGLGPLLNRKLCTIDLAKRTIES-PRYGLSFLKEL-LGIETEVH--------  212 (259)
T ss_pred             HHHCCC--EEEEECCHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHCCC-CCCCHHHHHHH-CCCCCCCC--------
T ss_conf             996889--5999372760999999999839997689856608999987587-78788999997-59899999--------


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             4432368999986459999999999999997
Q gi|254780636|r  143 DDLSDEQLQYAASDVVHLHALRLQFTEKLQR  173 (207)
Q Consensus       143 rpLs~~Qi~YAA~Dv~~l~~L~~~l~~~L~~  173 (207)
T Consensus       213 --------HRAl~DA~aTaevF~~~L~~l~~  235 (259)
T PRK08517        213 --------HRAYADALAAYEIFEICLLNLPS  235 (259)
T ss_pred             --------CCCHHHHHHHHHHHHHHHHHCCC
T ss_conf             --------78458899999999999985665