HHsearch alignment for GI: 254780636 and conserved domain: PRK10829
>PRK10829 ribonuclease D; Provisional.
Probab=100.00 E-value=0 Score=323.69 Aligned_cols=185 Identities=24% Similarity=0.344 Sum_probs=166.7
Q ss_pred CCEEECCC--CCCHHHH-CCCCCCEEEECCCCCCCCCCCEEEEEEEEECCCCEEEECCCCCCCCCHHHHHHHHCCCCCEE
Q ss_conf 72153257--8885784-24898279971777898544507999984189428997465778570677677732364023
Q gi|254780636|r 2 TTIRVHEG--DIPAECA-ARYVDAIAVDTETLGLMPRRDRLCIVQLSPGDGTVDIIRIAAGQKNAPNLVGMLVDEKREKI 78 (207)
Q Consensus 2 ~~~~~~~~--dl~~~~~-l~~~~~iaiDtEt~~l~~~~~~l~LiQl~~~~~~~~l~~~~~~~~~~~~L~~ll~d~~i~KV 78 (207)
T Consensus 1 m~y~~I~t~~~L~~~~~~l~~~~~iavDTEf~r~~ty~p~l~LiQi~~~~~~~lIDpl~-~-~dl~~l~~ll~~~~i~kv 78 (373)
T PRK10829 1 MNYQMITTDDALASLCEAVRAFPAIALDTEFVRTRTYYPQLGLIQLFDGEQLALIDPLG-I-TDWSPFKALLRDPSITKF 78 (373)
T ss_pred CEEEEECCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEEEEEEECCCEEEEECCC-C-CCHHHHHHHHCCCCCEEE
T ss_conf 91599798999999999970799189857745677789845899985189679994787-7-776999999709884165
Q ss_pred ECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEECCCCCCCCCHHHHHHHHHHHH
Q ss_conf 01000016888654200000004578988652110000008877765420024675200365654432368999986459
Q gi|254780636|r 79 FHYGRFDIAVLFYTFGVRVRPVFCTKIASRLTRTYTNQHGLKDNLKELLGINISKAQQSSDWSADDLSDEQLQYAASDVV 158 (207)
Q Consensus 79 ~Hn~~~D~~~L~~~~gi~~~~i~DT~ias~l~~~~~~~~~L~~L~~~~lg~~ldK~~q~SdW~~rpLs~~Qi~YAA~Dv~ 158 (207)
T Consensus 79 ~Haa~qDle~l~~~~g~~p~~iFDTQiAa~~l-g~~~~~gy~~Lv~~~l~v~l~K~~~~sDW~~RPLs~~ql~YA~~DV~ 157 (373)
T PRK10829 79 LHAGSEDLEVFLNAFGELPQPLIDTQILAAFC-GRPLSWGFASMVEEYSGVALDKSESRTDWLARPLSERQCEYAAADVW 157 (373)
T ss_pred EECCCCHHHHHHHHCCCCCCHHHHHHHHHHHC-CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 20642159999998198874077648899865-78655589999999939665666462757889999899999999999
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf 9999999999999974918999999964006
Q gi|254780636|r 159 HLHALRLQFTEKLQRLGRSDLATSCCNFLMD 189 (207)
Q Consensus 159 ~l~~L~~~l~~~L~~~~~~~~~~~e~~~l~~ 189 (207)
T Consensus 158 yL~~l~~~L~~~l~~~~r~~w~~eE~~~l~~ 188 (373)
T PRK10829 158 YLLPIAAKLMVETEAAGWLPAALDECRLMQQ 188 (373)
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf 9999999999999835755899999999972