HHsearch alignment for GI: 254780636 and conserved domain: cd06146

>cd06146 mut-7_like_exo The mut-7 subfamily is composed of Caenorhabditis elegans mut-7 and similar proteins found in plants and metazoans. Mut-7 is implicated in posttranscriptional gene silencing. It contains a DEDDy-type DnaQ-like 3'-5' exonuclease domain possessing three conserved sequence motifs, termed ExoI, ExoII and ExoIII, with a specific YX(3)D pattern at ExoIII. These motifs are clustered around the active site and contain four conserved acidic residues that serve as ligands for the two metal ions required for catalysis.
Probab=100.00  E-value=1.9e-39  Score=248.55  Aligned_cols=159  Identities=23%  Similarity=0.264  Sum_probs=131.2

Q ss_pred             CCCCCHHH---HCCCCCCEEEECCCC--CCCCCCCEEEEEEEEECCCCEEEECCCCCCCC-----CHHHHHHHHCCCCCE
Q ss_conf             57888578---424898279971777--89854450799998418942899746577857-----067767773236402
Q gi|254780636|r    8 EGDIPAEC---AARYVDAIAVDTETL--GLMPRRDRLCIVQLSPGDGTVDIIRIAAGQKN-----APNLVGMLVDEKREK   77 (207)
Q Consensus         8 ~~dl~~~~---~l~~~~~iaiDtEt~--~l~~~~~~l~LiQl~~~~~~~~l~~~~~~~~~-----~~~L~~ll~d~~i~K   77 (207)
T Consensus         7 ~~~l~~~~~~~~l~~~~vvg~D~Ew~~~~~~~~~~~vaLiQlat~~~-~~liD~~~~~~~~~~~~~~~L~~ll~~~~i~K   85 (191)
T cd06146           7 EEELEALLLALSLEAGRVVGIDSEWKPSFLGDSDPRVAILQLATEDE-VFLLDLLALENLESEDWDRLLKRLFEDPDVLK   85 (191)
T ss_pred             HHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEEEEEEECCCC-CEEEEEECCCCCCHHHHHHHHHHHHCCCCEEE
T ss_conf             99999999998426898899978757877788889527999952997-58999704565434778999999947999689


Q ss_pred             EECCCCHHHHHHHHHHHC------CCCCHHHHHHHHHHHHHH----------CCCHHHHHHHHHHHCCCCCCCCEECCCC
Q ss_conf             301000016888654200------000004578988652110----------0000088777654200246752003656
Q gi|254780636|r   78 IFHYGRFDIAVLFYTFGV------RVRPVFCTKIASRLTRTY----------TNQHGLKDNLKELLGINISKAQQSSDWS  141 (207)
Q Consensus        78 V~Hn~~~D~~~L~~~~gi------~~~~i~DT~ias~l~~~~----------~~~~~L~~L~~~~lg~~ldK~~q~SdW~  141 (207)
T Consensus        86 vg~~~~~D~~~L~~~~~~~~~~~~~~~~~~Dl~~~a~~~~~~~~~~~~~~~~~~~~gL~~L~~~~lg~~l~K~~q~SnW~  165 (191)
T cd06146          86 LGFGFKQDLKALSASYPALKCMFERVQNVLDLQNLAKELQKSDMGRLKGNLPSKTKGLADLVQAVLGKPLDKSEQCSNWE  165 (191)
T ss_pred             EEECHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf             99443868999998658643233364403579999999731122101100355675699999999098788565138999


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             54432368999986459999999999
Q gi|254780636|r  142 ADDLSDEQLQYAASDVVHLHALRLQF  167 (207)
Q Consensus       142 ~rpLs~~Qi~YAA~Dv~~l~~L~~~l  167 (207)
T Consensus       166 ~rPLt~~Qi~YAA~Da~~ll~iy~~L  191 (191)
T cd06146         166 RRPLREEQILYAALDAYCLLEVFDKL  191 (191)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHC
T ss_conf             99899999999999899999999739