HHsearch alignment for GI: 254780636 and conserved domain: cd06148

>cd06148 Egl_like_exo The Egalitarian (Egl) protein subfamily is composed of Drosophila Egl and similar proteins. Egl is a component of an mRNA-binding complex which is required for oocyte specification. Egl contains a DEDDy-type DnaQ-like 3'-5' exonuclease domain possessing three conserved sequence motifs termed ExoI, ExoII and ExoIII, with a specific YX(3)D pattern at ExoIII. The motifs are clustered around the active site and contain four conserved acidic residues that serve as ligands for the two metal ions required for catalysis. The conservation of this subfamily throughout eukaryotes suggests that its members may be part of ancient RNA processing complexes that are likely to participate in the regulated processing of specific mRNAs.
Probab=100.00  E-value=3.1e-43  Score=270.53  Aligned_cols=169  Identities=24%  Similarity=0.319  Sum_probs=147.3

Q ss_pred             HHHCCCCCCEEEECCCCCCCCCCCEEEEEEEEECCCCEEEECCCCCCCC--CHHHHHHHHCCCCCEEECCCCHHHHHHHH
Q ss_conf             7842489827997177789854450799998418942899746577857--06776777323640230100001688865
Q gi|254780636|r   14 ECAARYVDAIAVDTETLGLMPRRDRLCIVQLSPGDGTVDIIRIAAGQKN--APNLVGMLVDEKREKIFHYGRFDIAVLFY   91 (207)
Q Consensus        14 ~~~l~~~~~iaiDtEt~~l~~~~~~l~LiQl~~~~~~~~l~~~~~~~~~--~~~L~~ll~d~~i~KV~Hn~~~D~~~L~~   91 (207)
T Consensus         4 i~~L~~~~vi~iD~E~~~~~~~-g~l~LiQiat~~~~vyl~D~~~~~~~~~~~~Lk~iLe~~~I~KV~H~~r~D~~~L~~   82 (197)
T cd06148           4 IIHLKKQKVIGLDCEGVNLGRK-GKLCLVQIATRTGQIYLFDILKLGSIVFINGLKDILESKKILKVIHDCRRDSDALYH   82 (197)
T ss_pred             HHHHHHCCEEEEECCCCCCCCC-CCEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHH
T ss_conf             9998759999998886788989-988799996489988999616676344568999995699823999610999999999


Q ss_pred             HHHCCCCCHHHHHHHHHHHHHHC-------CCHHHHHHHHHHHCCCCCCC--------CEECCCCCCCCCHHHHHHHHHH
Q ss_conf             42000000045789886521100-------00008877765420024675--------2003656544323689999864
Q gi|254780636|r   92 TFGVRVRPVFCTKIASRLTRTYT-------NQHGLKDNLKELLGINISKA--------QQSSDWSADDLSDEQLQYAASD  156 (207)
Q Consensus        92 ~~gi~~~~i~DT~ias~l~~~~~-------~~~~L~~L~~~~lg~~ldK~--------~q~SdW~~rpLs~~Qi~YAA~D  156 (207)
T Consensus        83 ~~gi~~~nvfDTqiA~~ll~~~~~~~~~~~~~~sl~~l~~~~l~~~~~~~~~~~~~~~~~~s~W~~RPLt~~ql~YAa~D  162 (197)
T cd06148          83 QYGIKLNNVFDTQVADALLQEQETGGFNPDRVISLVQLLDKYLYISISLKEDVKKLMREDPKFWALRPLTEDMIRYAALD  162 (197)
T ss_pred             HHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
T ss_conf             70997067031999999975313147677564159999999957640177877888750655446799999999999998


Q ss_pred             HHHHHHHHHHHHHHHHHCCCHHHHHHH
Q ss_conf             599999999999999974918999999
Q gi|254780636|r  157 VVHLHALRLQFTEKLQRLGRSDLATSC  183 (207)
Q Consensus       157 v~~l~~L~~~l~~~L~~~~~~~~~~~e  183 (207)
T Consensus       163 V~yL~~L~~~L~~~Li~~~~~~~~~~~  189 (197)
T cd06148         163 VLCLLPLYYAMLDALISKFLKAVFKYL  189 (197)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             999999999999999999999999998