HHsearch results for GI: 254780636 and protein with PDBid: 1uoc_A

>1uoc_A POP2; hydrolase, DEDD nuclease, mRNA degradation, poly(A) tail, transcription regulation, repressor, phosphorylation.; 2.3A {Saccharomyces cerevisiae} SCOP: c.55.3.9
Probab=97.50  E-value=0.0014  Score=38.81  Aligned_cols=140  Identities=14%  Similarity=0.197  Sum_probs=80.8

Q ss_pred             HCCCCCCEEEECCCCCCCCCC-------------------CEEEEEEEE----ECC-------CCEEEECCC--CCC--C
Q ss_conf             424898279971777898544-------------------507999984----189-------428997465--778--5
Q gi|254780636|r   16 AARYVDAIAVDTETLGLMPRR-------------------DRLCIVQLS----PGD-------GTVDIIRIA--AGQ--K   61 (207)
Q Consensus        16 ~l~~~~~iaiDtEt~~l~~~~-------------------~~l~LiQl~----~~~-------~~~~l~~~~--~~~--~   61 (207)
                      .+...+.||+|||++|+....                   +.+.+||++    ..+       ..++.+.+.  ...  .
T Consensus        34 ~i~~~~fVAiD~Ef~Gi~~~~~~~~~~t~~~rY~~lk~nv~~~~iiQlGlt~f~~~g~~~~~~~~~w~FNf~~~~~~~~~  113 (289)
T 1uoc_A           34 LVSQYNHVSISTEFVGTLARPIGTFRSKVDYHYQTMRANVDFLNPIQLGLSLSDANGNKPDNGPSTWQFNFEFDPKKEIM  113 (289)
T ss_dssp             HTTTSCEEEEEEEEEC----------CHHHHHHHHHHHHHTTCEEEEEEEEEECTTCCCCSSSCSEEEEEBCCCTTCCCC
T ss_pred             HHHCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCCC
T ss_conf             98339989996251784578886668999999999998664363246999987048876888714789977448620232


Q ss_pred             CCH-----------------------HHHH------HHHCCCCCEEECCCCHHHHHHHHHH-HC-CC-------------
Q ss_conf             706-----------------------7767------7732364023010000168886542-00-00-------------
Q gi|254780636|r   62 NAP-----------------------NLVG------MLVDEKREKIFHYGRFDIAVLFYTF-GV-RV-------------   97 (207)
Q Consensus        62 ~~~-----------------------~L~~------ll~d~~i~KV~Hn~~~D~~~L~~~~-gi-~~-------------   97 (207)
                      .+.                       ...+      ++.++++.||+||+-+|+..|.+.+ |- .|             
T Consensus       114 ~~~Si~fL~~~G~DFnk~~~~GI~~~~f~~~~~~s~l~~~~~~~wv~f~g~yD~~yl~k~l~~~~LP~~~~~F~~~~~~~  193 (289)
T 1uoc_A          114 STESLELLRKSGINFEKHENLGIDVFEFSQLLMDSGLMMDDSVTWITYHAAYDLGFLINILMNDSMPNNKEDFEWWVHQY  193 (289)
T ss_dssp             CHHHHHHHHHTTCCHHHHHHHCBCHHHHHHHHHTSSCSSCTTSEEEESSTTHHHHHHHHHHTTSCCCSSHHHHHHHHHHH
T ss_pred             CHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHCCHHHCCCCEEEEECCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
T ss_conf             57789999985998689997199888888998750044247862896043557999999971898999999999999998


Q ss_pred             -CCHHHHHHHHHHHHHHCC-------------CHHHHHHHHHHHCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf             -000457898865211000-------------000887776542002467520036565443236899998645999999
Q gi|254780636|r   98 -RPVFCTKIASRLTRTYTN-------------QHGLKDNLKELLGINISKAQQSSDWSADDLSDEQLQYAASDVVHLHAL  163 (207)
Q Consensus        98 -~~i~DT~ias~l~~~~~~-------------~~~L~~L~~~~lg~~ldK~~q~SdW~~rpLs~~Qi~YAA~Dv~~l~~L  163 (207)
                       ..++||...++.+.+...             +.||..+++. +|++             +.  ..-+=|+.|+..+-.+
T Consensus       194 Fp~iyDtK~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~va~~-l~v~-------------r~--g~~HeAG~DS~lTg~~  257 (289)
T 1uoc_A          194 MPNFYDLNLVYKIIQEFKNPQLQQSSQQQQQQQYSLTTLADE-LGLP-------------RF--SIFTTTGGQSLLMLLS  257 (289)
T ss_dssp             CSSEEEHHHHHHHHTTTCC-------------CCSHHHHHHH-TTCC-------------CC--GGGGSHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHH-CCCC-------------CC--CCCCCCHHHHHHHHHH
T ss_conf             762613999998621335754343322101234888899987-2998-------------77--8886607899999999


Q ss_pred             HHHHHHHH
Q ss_conf             99999999
Q gi|254780636|r  164 RLQFTEKL  171 (207)
Q Consensus       164 ~~~l~~~L  171 (207)
                      +-++.+.+
T Consensus       258 F~~l~~~~  265 (289)
T 1uoc_A          258 FCQLSKLS  265 (289)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHHHH
T ss_conf             99999987