HHsearch results for GI: 254780636 and protein with PDBid: 2qxf_A

>2qxf_A Exodeoxyribonuclease I; alpha-beta domain, DNAQ superfamily, SH3-like domain, product bound structure, DNA damage, DNA repair, exonuclease; HET: TMP; 1.50A {Escherichia coli K12} SCOP: c.55.3.5 PDB: 1fxx_A* 3c94_A 3c95_A 3hl8_A* 3hp9_A*
Probab=98.39  E-value=3.6e-06  Score=53.86  Aligned_cols=134  Identities=19%  Similarity=0.070  Sum_probs=75.6

Q ss_pred             CCCCCEEEECCCCCCCCCCCEEEEEEEEE----CCC----C--EEEECCCCCCCCC------------------------
Q ss_conf             48982799717778985445079999841----894----2--8997465778570------------------------
Q gi|254780636|r   18 RYVDAIAVDTETLGLMPRRDRLCIVQLSP----GDG----T--VDIIRIAAGQKNA------------------------   63 (207)
Q Consensus        18 ~~~~~iaiDtEt~~l~~~~~~l~LiQl~~----~~~----~--~~l~~~~~~~~~~------------------------   63 (207)
                      .....|.+|+||||++|.++++  ||+|.    .+.    .  .+...+.......                        
T Consensus         7 ~~~~~v~~D~ETTGl~~~~d~i--iq~~ai~~d~~~~~~~~~~~~~~~~~~~~~p~~~a~~v~gi~~~~~~~~~~~~~e~   84 (482)
T 2qxf_A            7 QQSTFLFHDYETFGTHPALDRP--AQFAAIRTDSEFNVIGEPEVFYCKPADDYLPQPGAVLITGITPQEARAKGENEAAF   84 (482)
T ss_dssp             CCCEEEEEEEEESSSCTTTSCE--EEEEEEEECTTSCBCSCCEEEEBCCCTTCCCCHHHHHHHCCCHHHHHHHCBCHHHH
T ss_pred             CCCCEEEEEEECCCCCCCCCCE--EEEEEEEECCCCCEEEEEEEEEECCCCCCCCCHHHHHHHCCCHHHHHCCCCCHHHH
T ss_conf             6897899998878979999822--89999999899858514567763479999988789688494999997399999999


Q ss_pred             -HHHHHHHHCCCCCEEECC-CCHHHHHHHHHHH---CCC--------CCHHHHHHHHHHHHH-------------HCCCH
Q ss_conf             -677677732364023010-0001688865420---000--------000457898865211-------------00000
Q gi|254780636|r   64 -PNLVGMLVDEKREKIFHY-GRFDIAVLFYTFG---VRV--------RPVFCTKIASRLTRT-------------YTNQH  117 (207)
Q Consensus        64 -~~L~~ll~d~~i~KV~Hn-~~~D~~~L~~~~g---i~~--------~~i~DT~ias~l~~~-------------~~~~~  117 (207)
                       ..+.++++.+...-|||| +.||..+|...+-   ..|        ....||......+..             ...++
T Consensus        85 ~~~i~~~~~~~~~~~vg~N~~~FD~~~l~~~~~r~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (482)
T 2qxf_A           85 AARIHSLFTVPKTCILGYNNVRFDDEVTRNIFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGLPSF  164 (482)
T ss_dssp             HHHHHHHHTSTTEEEEESSTTTTHHHHHHHHHHHTTSCSSGGGTGGGCEEEEHHHHHHHHHHHCCTTSCCCBCTTSSBCC
T ss_pred             HHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf             99999998448976999676334799999998874478501220268750256888888864044221243234686646


Q ss_pred             HHHHHHHHHHCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             08877765420024675200365654432368999986459999999999999
Q gi|254780636|r  118 GLKDNLKELLGINISKAQQSSDWSADDLSDEQLQYAASDVVHLHALRLQFTEK  170 (207)
Q Consensus       118 ~L~~L~~~~lg~~ldK~~q~SdW~~rpLs~~Qi~YAA~Dv~~l~~L~~~l~~~  170 (207)
                      .|..++.. .|+.                ...-+=|..||.+|.+|...+.+.
T Consensus       165 kL~~l~~~-~~i~----------------~~~aHdA~~D~~~t~~l~~~l~~~  200 (482)
T 2qxf_A          165 RLEHLTKA-NGIE----------------HSNAHDAMADVYATIAMAKLVKTR  200 (482)
T ss_dssp             CHHHHHHH-TTCC----------------CC---CTTHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHH-CCCC----------------CCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             69999998-1998----------------778866355179999999999874