HHsearch results for GI: 254780636 and protein with PDBid: 3cg7_A
>3cg7_A CRN-4, cell death-related nuclease 4; hydrolase, apoptosis, 3'-5' exonuclease, deddh; 2.50A {Caenorhabditis elegans} PDB: 3cm5_A 3cm6_A
Probab=94.39 E-value=0.22 Score=26.07 Aligned_cols=134 Identities=10% Similarity=0.088 Sum_probs=66.8
Q ss_pred CCEEEECCCCCCCCCCCE-EEEEEEEE-----CCCC------EE-EECCCCCCCC-----------------CH------
Q ss_conf 827997177789854450-79999841-----8942------89-9746577857-----------------06------
Q gi|254780636|r 21 DAIAVDTETLGLMPRRDR-LCIVQLSP-----GDGT------VD-IIRIAAGQKN-----------------AP------ 64 (207)
Q Consensus 21 ~~iaiDtEt~~l~~~~~~-l~LiQl~~-----~~~~------~~-l~~~~~~~~~-----------------~~------ 64 (207)
..|.||+||||+++.++. --.|||+. ..+. +. ++.+...... ++
T Consensus 20 ~~vViD~ETTg~~~~~d~~~EIIEIgaV~vd~~~~~i~~~~~F~~~VkP~~~~~ls~~~~~ltGIt~e~v~~ap~f~evl 99 (308)
T 3cg7_A 20 TLLILDFETTSDAANQDYPCEVIQFAIVAYDVPNDKIREDISFNKYVKPVLNRTLTKNCVDFTGIPQRSIDTADTFDVVY 99 (308)
T ss_dssp EEEEEEEEECCBTTBCSCCCCEEEEEEEEEETTTTEEEEEEEEEEECBCSSBCSCCHHHHHHHCCCHHHHHTSCBHHHHH
T ss_pred EEEEEEEEECCCCCCCCCCCEEEEEEEEEEEECCCEEEECCEEEEEECCCCCCCCCHHHHHHCCCCHHHHHCCCHHHHHH
T ss_conf 18999976089987889996079999999980599897841888778988888679889987197989943110045668
Q ss_pred -HHHHHHHCCCC----CEEECCCCHHHH-HHHHHH---HCCC----CCHHHHHHHH-HHHH-----HHCCCHHHHHHHHH
Q ss_conf -77677732364----023010000168-886542---0000----0004578988-6521-----10000008877765
Q gi|254780636|r 65 -NLVGMLVDEKR----EKIFHYGRFDIA-VLFYTF---GVRV----RPVFCTKIAS-RLTR-----TYTNQHGLKDNLKE 125 (207)
Q Consensus 65 -~L~~ll~d~~i----~KV~Hn~~~D~~-~L~~~~---gi~~----~~i~DT~ias-~l~~-----~~~~~~~L~~L~~~ 125 (207)
.+.+++.+..+ .-+.+++.+|.. ++.+.+ |+.. .+.+|++-.. .... ....+++|..++++
T Consensus 100 ~~f~~~l~~~~l~~~~~~f~~~~~~D~~~~L~~~~~~~~i~~P~~~~~~iDl~~~~~~~~~~~~~~~~~~~~~L~~l~~~ 179 (308)
T 3cg7_A 100 EQFQQWLITLGLEEGKFAFVCDSRQDLWRIAQYQMKLSNIQMPAFFRQYINLYKIFTNEMDRMGPKELSATTNIGKMNEY 179 (308)
T ss_dssp HHHHHHHHHHCCCTTSEEEEESSSHHHHTHHHHHHHHTTCCCCGGGSEEEEHHHHHHHHHHHHCCCCCCCCSHHHHHHHH
T ss_pred HHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
T ss_conf 89999973677323289993154566999999999980999872013244599999999997432277777789999997
Q ss_pred HHCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 420024675200365654432368999986459999999999999
Q gi|254780636|r 126 LLGINISKAQQSSDWSADDLSDEQLQYAASDVVHLHALRLQFTEK 170 (207)
Q Consensus 126 ~lg~~ldK~~q~SdW~~rpLs~~Qi~YAA~Dv~~l~~L~~~l~~~ 170 (207)
+|++.. . +-+-|..||..+.+|+.+|.++
T Consensus 180 -~gI~~~---------g------~aH~ALdDA~~tA~Il~kLl~~ 208 (308)
T 3cg7_A 180 -YDLPTI---------G------RAHDAMDDCLNIATILQRMINM 208 (308)
T ss_dssp -TTCCCC---------S------CTTCHHHHHHHHHHHHHHHHHT
T ss_pred -CCCCCC---------C------CCCCHHHHHHHHHHHHHHHHHC
T ss_conf -699999---------9------8968099999999999999977