HHsearch results for GI: 254780636 and protein with PDBid: 3iay_A
>3iay_A DNA polymerase delta catalytic subunit; protein-DNA complex, DNA replication, DNA- binding, DNA-directed DNA polymerase, exonuclease; HET: DNA DOC DCP; 2.00A {Saccharomyces cerevisiae}
Probab=96.52 E-value=0.012 Score=33.43 Aligned_cols=102 Identities=17% Similarity=0.056 Sum_probs=60.0
Q ss_pred HHHHH--HCCCCCEEECCC-CHHHHHHHHHH---HCC----------------------------------CCC--HHHH
Q ss_conf 76777--323640230100-00168886542---000----------------------------------000--0457
Q gi|254780636|r 66 LVGML--VDEKREKIFHYG-RFDIAVLFYTF---GVR----------------------------------VRP--VFCT 103 (207)
Q Consensus 66 L~~ll--~d~~i~KV~Hn~-~~D~~~L~~~~---gi~----------------------------------~~~--i~DT 103 (207)
+..++ .||+|+ +|||+ .||+..|.+.. |+. +.+ ++|+
T Consensus 320 F~~~i~~~DPDII-~GyNi~~FDlpYL~~Ra~~l~i~~~~~~gr~~~~~~~~~~~~~~~~~~g~~~~~~~~i~Gr~~iDl 398 (919)
T 3iay_A 320 WRNFIIKVDPDVI-IGYNTTNFDIPYLLNRAKALKVNDFPYFGRLKTVKQEIKESVFSSKAYGTRETKNVNIDGRLQLDL 398 (919)
T ss_dssp HHHHHHHHCCSEE-EESSTTTTHHHHHHHHHHHTTCTTCSCCSSBTTCCCCBCCEEEEETTTEEEEECCBCCTTCEEEEH
T ss_pred HHHHHHHCCCCEE-EEECCCCCCHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEEH
T ss_conf 9999866299879-875785753799999999858751433176577664456564345433564422898737899877
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHCCCCCC-C-CEECC-CCCCC-CCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 898865211000000887776542002467-5-20036-56544-3236899998645999999999999
Q gi|254780636|r 104 KIASRLTRTYTNQHGLKDNLKELLGINISK-A-QQSSD-WSADD-LSDEQLQYAASDVVHLHALRLQFTE 169 (207)
Q Consensus 104 ~ias~l~~~~~~~~~L~~L~~~~lg~~ldK-~-~q~Sd-W~~rp-Ls~~Qi~YAA~Dv~~l~~L~~~l~~ 169 (207)
.-..+-. ....+++|.+++++++|.+-.. . ...++ |...+ -...-+.|+..||..+..|.+++.-
T Consensus 399 ~~~~~~~-~kl~sy~L~~Va~~~lg~~K~dv~~~~i~~~~~~~~e~~~~l~~Y~l~Da~l~~~L~~kl~~ 467 (919)
T 3iay_A 399 LQFIQRE-YKLRSYTLNAVSAHFLGEQKEDVHYSIISDLQNGDSETRRRLAVYCLKDAYLPLRLMEKLMA 467 (919)
T ss_dssp HHHHHHH-CCCSCCCHHHHHHHHHCCC------CCHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHTTH
T ss_pred HHHHHHH-CCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999875-65672328999987715887643044435777535267999999985436889999999999