HHsearch results for GI: 254780636 and protein with PDBid: 3nae_A
>3nae_A DNA polymerase, GP43; RB69 DNA polymerase; HET: DNA G35 DOC DTP; 2.00A {Enterobacteria phage RB69} PDB: 3lzi_A* 3lzj_A* 1ig9_A* 1q9x_A* 2atq_A* 2dy4_A* 2oyq_A* 2ozm_A* 2ozs_A* 2p5g_A* 2p5o_A* 1q9y_A* 3l8b_A* 3lds_A* 3cq8_A* 1ih7_A* 1clq_A* 1waf_A* 1waj_A* 3cfr_A* ...
Probab=96.79 E-value=0.0059 Score=35.15 Aligned_cols=97 Identities=10% Similarity=-0.041 Sum_probs=55.0
Q ss_pred HCCCCCEEECCC-CHHHHHHHHHHHCC-------------------------------C--CCHHHHHHHHH-HHHHHCC
Q ss_conf 323640230100-00168886542000-------------------------------0--00045789886-5211000
Q gi|254780636|r 71 VDEKREKIFHYG-RFDIAVLFYTFGVR-------------------------------V--RPVFCTKIASR-LTRTYTN 115 (207)
Q Consensus 71 ~d~~i~KV~Hn~-~~D~~~L~~~~gi~-------------------------------~--~~i~DT~ias~-l~~~~~~ 115 (207)
.||+|+ +|||+ .||+..|.+..... + ..++|.+-..+ .......
T Consensus 208 ~dPDII-~GyN~~~FD~pYL~~R~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~G~~~lD~~~l~~k~~~~~~~ 286 (903)
T 3nae_A 208 KTPVIL-TGWNVESFAIPYVYNRIKNIFGESTAKRLSPHRKTRVKVIENMYGSREIITLFGISVLDYIDLYKKFSFTNQP 286 (903)
T ss_dssp TCCSEE-ECSSTTTTHHHHHHHHHHHHHCHHHHGGGSTTSCEEEEEEEETTEEEEEEEETTCEECCHHHHHHHHSCCCCS
T ss_pred CCCCEE-EECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECEEEEEHHHHHHHHHHHCCC
T ss_conf 599899-9689877679999999998557632211254567652100002355314666043675289999998760201
Q ss_pred CHHHHHHHHHHHCCCCCCCC-EECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 00088777654200246752-0036565443236899998645999999999999
Q gi|254780636|r 116 QHGLKDNLKELLGINISKAQ-QSSDWSADDLSDEQLQYAASDVVHLHALRLQFTE 169 (207)
Q Consensus 116 ~~~L~~L~~~~lg~~ldK~~-q~SdW~~rpLs~~Qi~YAA~Dv~~l~~L~~~l~~ 169 (207)
+++|..++..++|..-.+.. ...++.... ...-+.|...|+..+.+|.+++.-
T Consensus 287 sy~Ld~va~~~Lg~~k~~~~~~~~~~~~~~-~~~~~~Y~~~D~~L~~~L~~kl~~ 340 (903)
T 3nae_A 287 SYSLDYISEFELNVGKLKYDGPISKLRESN-HQRYISYNIIAVYRVLQIDAKRQF 340 (903)
T ss_dssp CCCHHHHHHHHHCCCCCCCSSCGGGHHHHH-HHHHHHHHHHHHHHHHHHHHHHCH
T ss_pred CCHHHHHHHHHCCCCCCCCCCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 123999999972888764421032330467-888988743279999999999878