PSIBLAST alignment of GI: 254780636 and protein with PDB id: 2hbj
>gi|112491261|pdb|2HBJ|A Chain A, Structure Of The Yeast Nuclear Exosome Component, Rrp6p, Reveals An Interplay Between The Active Site And The Hrdc Domain Length = 410
>gi|112491264|pdb|2HBK|A Chain A, Structure Of The Yeast Nuclear Exosome Component, Rrp6p, Reveals An Interplay Between The Active Site And The Hrdc Domain; Protein In Complex With Mn Length = 410
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 38/162 (23%), Positives = 60/162 (37%), Gaps = 3/162 (1%)
Query: 16 AARYVDAIAVDTETLGLMPRRDRLCIVQLSPGDGTVDIIRIAAGQKNAPNLVGMLVDEKR 75
+ IAVD E +C++Q+S + ++ ++N L + +
Sbjct: 102 DLKNTKEIAVDLEHHDYRSYYGIVCLMQISTRERD-YLVDTLKLRENLHILNEVFTNPSI 160
Query: 76 EKIFHYGRFDIAVLFYTFGVRVRPVFCTKIASRLTRTYTNQHGLKDNLKELLGINISKAQ 135
K+FH DI L G+ V +F T AS+ +H L L+ SK
Sbjct: 161 VKVFHGAFMDIIWLQRDLGLYVVGLFDTYHASKAIG--LPRHSLAYLLENFANFKTSKKY 218
Query: 136 QSSDWSADDLSDEQLQYAASDVVHLHALRLQFTEKLQRLGRS 177
Q +DW LS A +D L + Q KL +
Sbjct: 219 QLADWRIRPLSKPMTAAARADTHFLLNIYDQLRNKLIESNKL 260