RPSBLAST alignment for GI: 254780636 and conserved domain: cd06140
>gnl|CDD|176652 cd06140, DNA_polA_I_Bacillus_like_exo, inactive DEDDy 3'-5' exonuclease domain of Bacillus stearothermophilus DNA polymerase I and similar family-A DNA polymerases. Bacillus stearothermophilus-like Polymerase I (Pol I), a subgroup of the family-A DNA polymerases, contains an inactive DnaQ-like 3'-5' exonuclease domain in the same polypeptide chain as the polymerase region. The exonuclease-like domain of these proteins possess the same fold as the Klenow fragment (KF) of Escherichia coli Pol I, but does not contain the four critical metal-binding residues necessary for activity. The function of this domain is unknown. It might act as a spacer between the polymerase and the 5'-3' exonuclease domains. Some members of this subgroup, such as those from Bacillus sphaericus and Thermus aquaticus, are thermostable DNA polymerases. Length = 178
Score = 40.3 bits (95), Expect = 4e-04
Identities = 34/165 (20%), Positives = 62/165 (37%), Gaps = 10/165 (6%)
Query: 21 DAIAVDTETLGLMPRRDRLCIVQLSPGDGTVDIIRIAAGQKNAPNLVGMLVDEKREKIFH 80
D +A+ E LG + + L+ G G I + + L L DEK K+ H
Sbjct: 4 DEVALYVELLGENYHTADIIGLALANGGGAY-YIPLELALLDLAALKEWLEDEKIPKVGH 62
Query: 81 YGRFDIAVLFYTFGVRVRPV-FCTKIASRLTRTYTNQHGLKDNLKELLGINISKA----- 134
+ V G+ + V F T +A+ L + + L D K LG +
Sbjct: 63 DAKRAY-VALKRHGIELAGVAFDTMLAAYLLDPTRSSYDLADLAKRYLGRELPSDEEVYG 121
Query: 135 QQSSDWSADDLSDEQLQYAASDVVHLHALRLQFTEKLQRLGRSDL 179
+ + D+ + ++ A + L + E+L+ + +L
Sbjct: 122 KGAKFAVPDE--EVLAEHLARKAAAIARLAPKLEEELEENEQLEL 164