RPSBLAST alignment of GI: 254780636 and protein with PDBid: 1vk0
>1vk0_A Hypothetical protein; homohexamer, AT5G06450, structural genomics, protein structure initiative, center for eukaryotic structural genomics; 2.10A {Arabidopsis thaliana} SCOP: c.55.3.5 PDB: 2q3s_A Length = 206
Score = 90.1 bits (223), Expect = 3e-19
Identities = 24/169 (14%), Positives = 54/169 (31%), Gaps = 14/169 (8%)
Query: 14 ECAARYVDAIAVDTETLGLMPRRD--------RLCIVQLSPGDGTVDIIRI-AAGQKNAP 64
+ A+ D P + L V+LS + + +R+ N
Sbjct: 40 DSILNGNRAVIFDVYWDVGFPETETKTKTSGWSLSSVKLSTRNLCL-FLRLPKPFHDNLK 98
Query: 65 NLVGMLVDEKREKIFHYGRFDIAVLFYTFGVRVRPVFCT--KIASRLTRTYTNQHGLKDN 122
+L + + D+ +L G+ +R A G ++
Sbjct: 99 DLYRFFASKFVTFVGVQIEEDLDLLRENHGLVIRNAINVGKLAAEARGTLVLEFLGTREL 158
Query: 123 LKELLGINISK-AQQSSDWSADDLSDEQLQYAASDVVHLHALRLQFTEK 170
+L ++ + + W +EQL+ AA + + + Q +++
Sbjct: 159 AHRVLWSDLGQLDSIEAKWEKA-GPEEQLEAAAIEGWLIVNVWDQLSDE 206